Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476936

Identifier: 113476936

GI number: 113476936

Start: 5250054

End: 5250512

Strand: Reverse

Name: 113476936

Synonym: Tery_3431

Alternate gene names: NA

Gene position: 5250512-5250054 (Counterclockwise)

Preceding gene: 113476937

Following gene: 113476934

Centisome position: 67.75

GC content: 37.69

Gene sequence:

>459_bases
ATGGCATCTCACGATCAAGTTAGAAAATACATTGCCTATTGGTTTCAATTAGGTAAGAAAATGTTAACTAGAAATGGCCA
AGAATCTTTCGTCCCTCAAGTTATACTATCAGGCGATCGCTACACTCAAGAATTTGAAGAATGCTGGCAGAAAATTTTAT
CATCTGAATCAGGAGATTGTTATTTAGAAGGAACTAATCAGACAACTGAAGAATTATTATCTCCACAATGGGATATTTGT
TCTTGCGCTCGTTGTTCGATGCCAATTCCATTTCATGTTAAAGGAATGCCTCCTGAGTACTGTCCATGTTTCGATCTTCC
TAACTGGCCTGACACTGAAACACCATTGCCACGAGCACCTATCAGTAGTAAATTATATCTGCTAAGTATTTGTGAGCGAC
TGTTAAGTGGCAAGAAGAAAGAAAACGTTGATACTTATCATCACAATTCTCCAAGATGA

Upstream 100 bases:

>100_bases
TGTATTAATTCTAATAAAATTAGATCTTAGAAAATTAAATTGTTTTAAATATTAAATATTTCTATTGACTATAAGTAAAA
AATTATCGGACATTTAAGTT

Downstream 100 bases:

>100_bases
AAAGTTGAAATTATATTAATCAATAGCGTTTCTCTAGAGAGTATGATACTTATCCCTCAAATAGAGACAATAATCAAATC
AATAATGGCCTTCCAGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MASHDQVRKYIAYWFQLGKKMLTRNGQESFVPQVILSGDRYTQEFEECWQKILSSESGDCYLEGTNQTTEELLSPQWDIC
SCARCSMPIPFHVKGMPPEYCPCFDLPNWPDTETPLPRAPISSKLYLLSICERLLSGKKKENVDTYHHNSPR

Sequences:

>Translated_152_residues
MASHDQVRKYIAYWFQLGKKMLTRNGQESFVPQVILSGDRYTQEFEECWQKILSSESGDCYLEGTNQTTEELLSPQWDIC
SCARCSMPIPFHVKGMPPEYCPCFDLPNWPDTETPLPRAPISSKLYLLSICERLLSGKKKENVDTYHHNSPR
>Mature_151_residues
ASHDQVRKYIAYWFQLGKKMLTRNGQESFVPQVILSGDRYTQEFEECWQKILSSESGDCYLEGTNQTTEELLSPQWDICS
CARCSMPIPFHVKGMPPEYCPCFDLPNWPDTETPLPRAPISSKLYLLSICERLLSGKKKENVDTYHHNSPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17583; Mature: 17452

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASHDQVRKYIAYWFQLGKKMLTRNGQESFVPQVILSGDRYTQEFEECWQKILSSESGDC
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE
YLEGTNQTTEELLSPQWDICSCARCSMPIPFHVKGMPPEYCPCFDLPNWPDTETPLPRAP
EEECCCCHHHHHCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ISSKLYLLSICERLLSGKKKENVDTYHHNSPR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASHDQVRKYIAYWFQLGKKMLTRNGQESFVPQVILSGDRYTQEFEECWQKILSSESGDC
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE
YLEGTNQTTEELLSPQWDICSCARCSMPIPFHVKGMPPEYCPCFDLPNWPDTETPLPRAP
EEECCCCHHHHHCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ISSKLYLLSICERLLSGKKKENVDTYHHNSPR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA