| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is tarA [H]
Identifier: 113476930
GI number: 113476930
Start: 5236560
End: 5237315
Strand: Reverse
Name: tarA [H]
Synonym: Tery_3422
Alternate gene names: 113476930
Gene position: 5237315-5236560 (Counterclockwise)
Preceding gene: 113476934
Following gene: 113476927
Centisome position: 67.58
GC content: 40.74
Gene sequence:
>756_bases ATGACCAAAAAAAATTTTGGGTCTGGACTTAGTCCACTTTCCCGCAATCTAGTGCTAGGTCTACCAGTACATTGTCTAGA TGATTATTCTAGTTGCTTACTTTCTCGATATGAAGCAGGAGTAGGAACTCATGTCGTGACACTAAATGCAGAAATGGTCA TGCAAAGTGAGAAAAATTATGTATTAGCTCAGATAATTCGTCAAGCTGATCTGGTCGTTCCTGATGGAGCTGGGGTAGTT TTATCTTTGAGACTTAAGGGTATATGTGTACAGCGTTGTCCTGGTATTGAATTAGCAGAAAGTATTTTGTGGCAAGCACC GAAACAAAATTTAGATAATTTAGTATTTTTCTATGGAGGAAAACCGGGGGTAGCCATGAAAGCTGCACATATTTGGCAAG AGAAACTCCCAGAGTTATCCATCGCTTGCCAGCATGGTTATCTATCTCCAGCAGAAGAGAGGGAACTTTTACAGACTTTA GCAGAACTACAACCAAGATTGATATTTGTGGGTTTAGGGGCGCCTCGTCAAGAGTTGTGGATAGCAGAAAATAAACATAT TTGTCCCAAGGCAATTTGGATTGGTATTGGTGGTAGTTTGGATATATGGGCTGGTTTAAAGAAAAGGGCGCCTGCTTGGT TTTCGGACAATTCTTTGGAGTGGTTGTATCGACTGTACCAGGAACCTTGGCGTTGGCGACGAATGTTGGCTCTACCACAA TTTGTTTGGAAAACTTTGATGGATGTTAATTTTTAA
Upstream 100 bases:
>100_bases CTAGCTGGAAATACCCGAATCAGTTAATGTAACTCAGTAAGTATTTTAAAGATTATCAATTGTCAAAAACAAAAATCCAT AAATATAAAATAGAATATCT
Downstream 100 bases:
>100_bases AGCAATAATATCTCCAACCTGTTTTTTTAAGGGGATGAAAAAATTTTCGGCATAAGTATTTTAAGGATATGACTTCAGCA GTTGTTGCTGATAACTGAAA
Product: N-acetylmannosaminyltransferase
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTKKNFGSGLSPLSRNLVLGLPVHCLDDYSSCLLSRYEAGVGTHVVTLNAEMVMQSEKNYVLAQIIRQADLVVPDGAGVV LSLRLKGICVQRCPGIELAESILWQAPKQNLDNLVFFYGGKPGVAMKAAHIWQEKLPELSIACQHGYLSPAEERELLQTL AELQPRLIFVGLGAPRQELWIAENKHICPKAIWIGIGGSLDIWAGLKKRAPAWFSDNSLEWLYRLYQEPWRWRRMLALPQ FVWKTLMDVNF
Sequences:
>Translated_251_residues MTKKNFGSGLSPLSRNLVLGLPVHCLDDYSSCLLSRYEAGVGTHVVTLNAEMVMQSEKNYVLAQIIRQADLVVPDGAGVV LSLRLKGICVQRCPGIELAESILWQAPKQNLDNLVFFYGGKPGVAMKAAHIWQEKLPELSIACQHGYLSPAEERELLQTL AELQPRLIFVGLGAPRQELWIAENKHICPKAIWIGIGGSLDIWAGLKKRAPAWFSDNSLEWLYRLYQEPWRWRRMLALPQ FVWKTLMDVNF >Mature_250_residues TKKNFGSGLSPLSRNLVLGLPVHCLDDYSSCLLSRYEAGVGTHVVTLNAEMVMQSEKNYVLAQIIRQADLVVPDGAGVVL SLRLKGICVQRCPGIELAESILWQAPKQNLDNLVFFYGGKPGVAMKAAHIWQEKLPELSIACQHGYLSPAEERELLQTLA ELQPRLIFVGLGAPRQELWIAENKHICPKAIWIGIGGSLDIWAGLKKRAPAWFSDNSLEWLYRLYQEPWRWRRMLALPQF VWKTLMDVNF
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=210, Percent_Identity=30.952380952381, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 28324; Mature: 28193
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKNFGSGLSPLSRNLVLGLPVHCLDDYSSCLLSRYEAGVGTHVVTLNAEMVMQSEKNY CCCCCCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCH VLAQIIRQADLVVPDGAGVVLSLRLKGICVQRCPGIELAESILWQAPKQNLDNLVFFYGG HHHHHHHHHCEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECC KPGVAMKAAHIWQEKLPELSIACQHGYLSPAEERELLQTLAELQPRLIFVGLGAPRQELW CCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHEE IAENKHICPKAIWIGIGGSLDIWAGLKKRAPAWFSDNSLEWLYRLYQEPWRWRRMLALPQ EECCCCCCCEEEEEECCCCCHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVWKTLMDVNF HHHHHHHHCCC >Mature Secondary Structure TKKNFGSGLSPLSRNLVLGLPVHCLDDYSSCLLSRYEAGVGTHVVTLNAEMVMQSEKNY CCCCCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCH VLAQIIRQADLVVPDGAGVVLSLRLKGICVQRCPGIELAESILWQAPKQNLDNLVFFYGG HHHHHHHHHCEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECC KPGVAMKAAHIWQEKLPELSIACQHGYLSPAEERELLQTLAELQPRLIFVGLGAPRQELW CCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHEE IAENKHICPKAIWIGIGGSLDIWAGLKKRAPAWFSDNSLEWLYRLYQEPWRWRRMLALPQ EECCCCCCCEEEEEECCCCCHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVWKTLMDVNF HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]