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The map label for this gene is 113476887

Identifier: 113476887

GI number: 113476887

Start: 5171618

End: 5172202

Strand: Reverse

Name: 113476887

Synonym: Tery_3373

Alternate gene names: NA

Gene position: 5172202-5171618 (Counterclockwise)

Preceding gene: 113476888

Following gene: 113476886

Centisome position: 66.74

GC content: 37.61

Gene sequence:

>585_bases
ATGAAGAGTCAAAACGGTTTAACTGTCATTAAAAAGGCGGCTATCTTAGGACTAATAGGAGTTAGTGCTAGCTTCAGTCT
ACCTGCAGTAGCAAACTGCCTTCAAAAATCTTCTAAACAGGGAGTAGTTAACCAACCGTTACAAGTTGCCGGCTCTCACT
CTCATTCTAAATCTAAGGATATTGTGACAACTGCAGTAGAAGCAGGACAATTCAATACTTTAGCTGCAGCACTAAAAGCT
GCTGGTTTAGTAGAAGTACTTCAAGGAAAAGGTCCATTTACAGTATTTGCACCTACTGATGAAGCATTTGCAGCTCTACC
AAAAGGAACAGTAGAAAAGTTACTAATGCCAGAAAACAAAGACCAACTAATCAAAATTCTAACTTATCATGTAGTTGGAG
GTAAGTTAATGTCTAGTAACTTAGAGCCTGGAATGGTAAAAACTGTTGAAGGTAGTAAAGTAAACGTGAAAATTTCTGGT
ACAGGGGTGAAGGTTGATGATGCTAAAGTGATCAAAGCAGACGTACCTGCAAGTAATGGTGTAATTCACGTAATTGATAC
AGTTATAATACCACCTAATAATTAA

Upstream 100 bases:

>100_bases
AATTTTTTTTGATTTTTAACTATATTGACAGTTATCAAAACTTTGTTAAAATACTGTTAGTAACTTTACAATAGTTAATA
AAAAAACAGGAAACTTAATA

Downstream 100 bases:

>100_bases
GTTTTAAGGTTTATAAATAAGTGTCCATAAAAAGACTTAATATAGTTAAGTTTTGTAAACTAACTCTAAGCTAGGACTGA
CATTTGATTAGAGGCAAATT

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKSQNGLTVIKKAAILGLIGVSASFSLPAVANCLQKSSKQGVVNQPLQVAGSHSHSKSKDIVTTAVEAGQFNTLAAALKA
AGLVEVLQGKGPFTVFAPTDEAFAALPKGTVEKLLMPENKDQLIKILTYHVVGGKLMSSNLEPGMVKTVEGSKVNVKISG
TGVKVDDAKVIKADVPASNGVIHVIDTVIIPPNN

Sequences:

>Translated_194_residues
MKSQNGLTVIKKAAILGLIGVSASFSLPAVANCLQKSSKQGVVNQPLQVAGSHSHSKSKDIVTTAVEAGQFNTLAAALKA
AGLVEVLQGKGPFTVFAPTDEAFAALPKGTVEKLLMPENKDQLIKILTYHVVGGKLMSSNLEPGMVKTVEGSKVNVKISG
TGVKVDDAKVIKADVPASNGVIHVIDTVIIPPNN
>Mature_194_residues
MKSQNGLTVIKKAAILGLIGVSASFSLPAVANCLQKSSKQGVVNQPLQVAGSHSHSKSKDIVTTAVEAGQFNTLAAALKA
AGLVEVLQGKGPFTVFAPTDEAFAALPKGTVEKLLMPENKDQLIKILTYHVVGGKLMSSNLEPGMVKTVEGSKVNVKISG
TGVKVDDAKVIKADVPASNGVIHVIDTVIIPPNN

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=126, Percent_Identity=39.6825396825397, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI209862911, Length=171, Percent_Identity=30.9941520467836, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI209863034, Length=171, Percent_Identity=30.9941520467836, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI209863011, Length=171, Percent_Identity=30.9941520467836, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI209862907, Length=171, Percent_Identity=30.9941520467836, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI61743978, Length=127, Percent_Identity=33.0708661417323, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28574452, Length=137, Percent_Identity=36.4963503649635, Blast_Score=78, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 20074; Mature: 20074

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQNGLTVIKKAAILGLIGVSASFSLPAVANCLQKSSKQGVVNQPLQVAGSHSHSKSKD
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC
IVTTAVEAGQFNTLAAALKAAGLVEVLQGKGPFTVFAPTDEAFAALPKGTVEKLLMPENK
CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCHHHHHCCCCCH
DQLIKILTYHVVGGKLMSSNLEPGMVKTVEGSKVNVKISGTGVKVDDAKVIKADVPASNG
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEECCCEEEEECCCCCCC
VIHVIDTVIIPPNN
EEEEEEEEEECCCC
>Mature Secondary Structure
MKSQNGLTVIKKAAILGLIGVSASFSLPAVANCLQKSSKQGVVNQPLQVAGSHSHSKSKD
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC
IVTTAVEAGQFNTLAAALKAAGLVEVLQGKGPFTVFAPTDEAFAALPKGTVEKLLMPENK
CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCHHHHHCCCCCH
DQLIKILTYHVVGGKLMSSNLEPGMVKTVEGSKVNVKISGTGVKVDDAKVIKADVPASNG
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEECCCEEEEECCCCCCC
VIHVIDTVIIPPNN
EEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]