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The map label for this gene is 113476886

Identifier: 113476886

GI number: 113476886

Start: 5170315

End: 5170887

Strand: Reverse

Name: 113476886

Synonym: Tery_3372

Alternate gene names: NA

Gene position: 5170887-5170315 (Counterclockwise)

Preceding gene: 113476887

Following gene: 113476885

Centisome position: 66.72

GC content: 36.13

Gene sequence:

>573_bases
ATGAACGGCCAAAATCTTCTGAATCTCTTCTTCAAAAAGCCTGTCAAGATATTAGGATTAATCTGTGCTACTTTAGGGTT
AATCTTTACTAGCGCTTTTTATAGTTTACCCGCATTAGCTAATCAGCAATTAGTTAATCAACCTACACTTATTGCTTACG
CGGAATCAGATATTGTATCAACTGCAGTAGAAGCAGGTAAATTCAATACTTTAGCTGCAGCACTAAAAGCTGCTGATTTA
GTAGGTGTGCTTCAAGGAGAAGGTCCATTTACAGTCTTTGCACCTATTGATGAAGCATTTGCAGCTTTACCACCAGGATT
AGTAGAAGATTTATTACGTCCAGAAAATAAAGACAAACTAATCCAAATTCTAACTTATCATGTAGTTCCTGGTAAGGTAA
CATCTGGCGACTTAGAAAGTGGAAAGGTAAAAACTGTTGAAGGTGATGATATAGACGTTAAAGTTTCCAATGCAGGTGTT
AAAGTGGATGACGCTAATGTAATCATTCCAGATATACTTGCCAGTAATGGTGTAATTCATGTTATCGATTCTGTGATTAT
ACCATCCAAATAA

Upstream 100 bases:

>100_bases
GATATTATTAATACTAATGATTACCGTTATCTAAATATTGTTTAAATCATATTTTTGTACTATTATTTATTAATAGAACA
TCTAACAAAATAATAAAAGT

Downstream 100 bases:

>100_bases
TTAGTATGAGATTCTATGATGAGTGATACTTATTAACAGATGAAAATATTTTGAATAGACTCCATTCAAAAGCTAAGAAT
GGGGCTATTTTTAGCAATTT

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNGQNLLNLFFKKPVKILGLICATLGLIFTSAFYSLPALANQQLVNQPTLIAYAESDIVSTAVEAGKFNTLAAALKAADL
VGVLQGEGPFTVFAPIDEAFAALPPGLVEDLLRPENKDKLIQILTYHVVPGKVTSGDLESGKVKTVEGDDIDVKVSNAGV
KVDDANVIIPDILASNGVIHVIDSVIIPSK

Sequences:

>Translated_190_residues
MNGQNLLNLFFKKPVKILGLICATLGLIFTSAFYSLPALANQQLVNQPTLIAYAESDIVSTAVEAGKFNTLAAALKAADL
VGVLQGEGPFTVFAPIDEAFAALPPGLVEDLLRPENKDKLIQILTYHVVPGKVTSGDLESGKVKTVEGDDIDVKVSNAGV
KVDDANVIIPDILASNGVIHVIDSVIIPSK
>Mature_190_residues
MNGQNLLNLFFKKPVKILGLICATLGLIFTSAFYSLPALANQQLVNQPTLIAYAESDIVSTAVEAGKFNTLAAALKAADL
VGVLQGEGPFTVFAPIDEAFAALPPGLVEDLLRPENKDKLIQILTYHVVPGKVTSGDLESGKVKTVEGDDIDVKVSNAGV
KVDDANVIIPDILASNGVIHVIDSVIIPSK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=123, Percent_Identity=40.650406504065, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI209862911, Length=143, Percent_Identity=32.1678321678322, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI209863011, Length=143, Percent_Identity=32.1678321678322, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI209863034, Length=143, Percent_Identity=32.1678321678322, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI209862907, Length=143, Percent_Identity=32.1678321678322, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574452, Length=137, Percent_Identity=33.5766423357664, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 20019; Mature: 20019

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQNLLNLFFKKPVKILGLICATLGLIFTSAFYSLPALANQQLVNQPTLIAYAESDIVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH
TAVEAGKFNTLAAALKAADLVGVLQGEGPFTVFAPIDEAFAALPPGLVEDLLRPENKDKL
HHHHCCCHHHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHCCCHHHHHHHCCCCHHHH
IQILTYHVVPGKVTSGDLESGKVKTVEGDDIDVKVSNAGVKVDDANVIIPDILASNGVIH
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCCEEECHHHHCCCEEE
VIDSVIIPSK
EECCCCCCCC
>Mature Secondary Structure
MNGQNLLNLFFKKPVKILGLICATLGLIFTSAFYSLPALANQQLVNQPTLIAYAESDIVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH
TAVEAGKFNTLAAALKAADLVGVLQGEGPFTVFAPIDEAFAALPPGLVEDLLRPENKDKL
HHHHCCCHHHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHCCCHHHHHHHCCCCHHHH
IQILTYHVVPGKVTSGDLESGKVKTVEGDDIDVKVSNAGVKVDDANVIIPDILASNGVIH
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCCEEECHHHHCCCEEE
VIDSVIIPSK
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]