The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476877

Identifier: 113476877

GI number: 113476877

Start: 5159483

End: 5159773

Strand: Reverse

Name: 113476877

Synonym: Tery_3363

Alternate gene names: NA

Gene position: 5159773-5159483 (Counterclockwise)

Preceding gene: 113476878

Following gene: 113476876

Centisome position: 66.58

GC content: 38.14

Gene sequence:

>291_bases
ATGACTTATTTACTTACGACTACTAATACTCTGATGGCAAACTTGGAGGTAATGCCAAGCTTTCATGTTTTTTTGAGTAA
CTTGGCTACAGGAGAAATTACAATACTGACTGCTATATTTTGGCTGGCAGTTGCTAGCTTAATTTCAATTCTTGCTGGTG
CTATTGGTGGAATATGGTTAGCAGGAAAAGACTTAGGTTATGGTCTAGCTGCTACTATTGGTGGTTTGTTTGGTCCTGCT
GGTGTCATTCCTGCAGTTATTGTGGGTTTGACAATTTTGAAATTTGTTTAG

Upstream 100 bases:

>100_bases
TGTTAACTTTTAAATCTAAAGCCTAAAACCTAACACCTTAAAAGTCAATTGGTATAACTTGTAGAAAATAGTATGTTTCA
AGATAATTAGGAGAAGAAAA

Downstream 100 bases:

>100_bases
TTTCAAAAAAATGATTTTGAATAGGAGTTGATTTTTATGTTAGAAATAGGTTTGTATAGTGTCAAGTTGTTACTCAAGGG
TAAACTGCTACGAGATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTYLLTTTNTLMANLEVMPSFHVFLSNLATGEITILTAIFWLAVASLISILAGAIGGIWLAGKDLGYGLAATIGGLFGPA
GVIPAVIVGLTILKFV

Sequences:

>Translated_96_residues
MTYLLTTTNTLMANLEVMPSFHVFLSNLATGEITILTAIFWLAVASLISILAGAIGGIWLAGKDLGYGLAATIGGLFGPA
GVIPAVIVGLTILKFV
>Mature_95_residues
TYLLTTTNTLMANLEVMPSFHVFLSNLATGEITILTAIFWLAVASLISILAGAIGGIWLAGKDLGYGLAATIGGLFGPAG
VIPAVIVGLTILKFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9893; Mature: 9762

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS01199 RIBOSOMAL_L1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLLTTTNTLMANLEVMPSFHVFLSNLATGEITILTAIFWLAVASLISILAGAIGGIWL
CEEEEEEHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
AGKDLGYGLAATIGGLFGPAGVIPAVIVGLTILKFV
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TYLLTTTNTLMANLEVMPSFHVFLSNLATGEITILTAIFWLAVASLISILAGAIGGIWL
EEEEEEHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
AGKDLGYGLAATIGGLFGPAGVIPAVIVGLTILKFV
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA