| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476859
Identifier: 113476859
GI number: 113476859
Start: 5128019
End: 5128288
Strand: Reverse
Name: 113476859
Synonym: Tery_3344
Alternate gene names: NA
Gene position: 5128288-5128019 (Counterclockwise)
Preceding gene: 113476860
Following gene: 113476858
Centisome position: 66.17
GC content: 28.89
Gene sequence:
>270_bases ATGCTAAAGTATATAGTTATTGCTCTAATAACTCTAGAATTAATCTTACTAACTGGATTTTTTAAATCCCCAGCTCATGG CACAATGAGAGAATCAGAATTTTTTATTTGGGATTATGCCTCTTTGAGTAATTATCAGGTTGTTTGTAAAAAGTTGATAT TTCATCCTACAAATCGTAGGCTACCAGAATTATCAAAGATGAAACCTATAAATATTCATTCTCAAGTAGTAAATGATGAA TATTGTTCTAATTTAACTAAGCCTGTTTAA
Upstream 100 bases:
>100_bases GATTCCATGCCATAATAGTTTTAGTCTGACTACCAAGCTTATTGCAATATAAATAAGCTTTAAGGTATTTAAATATTTTT ATAATTCAACTAGGAGGTTT
Downstream 100 bases:
>100_bases TATTTTCTGATGATAGTTAAGGTAAAGATTTAGAAAAAAACTGATCAAACCGGGTTTAAATAATTAAAATCCGGTTTATT CATATTTCAGAGAATATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MLKYIVIALITLELILLTGFFKSPAHGTMRESEFFIWDYASLSNYQVVCKKLIFHPTNRRLPELSKMKPINIHSQVVNDE YCSNLTKPV
Sequences:
>Translated_89_residues MLKYIVIALITLELILLTGFFKSPAHGTMRESEFFIWDYASLSNYQVVCKKLIFHPTNRRLPELSKMKPINIHSQVVNDE YCSNLTKPV >Mature_89_residues MLKYIVIALITLELILLTGFFKSPAHGTMRESEFFIWDYASLSNYQVVCKKLIFHPTNRRLPELSKMKPINIHSQVVNDE YCSNLTKPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10345; Mature: 10345
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYIVIALITLELILLTGFFKSPAHGTMRESEFFIWDYASLSNYQVVCKKLIFHPTNRR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC LPELSKMKPINIHSQVVNDEYCSNLTKPV CCCCCCCCCCCHHHHHHCHHHHHHCCCCC >Mature Secondary Structure MLKYIVIALITLELILLTGFFKSPAHGTMRESEFFIWDYASLSNYQVVCKKLIFHPTNRR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC LPELSKMKPINIHSQVVNDEYCSNLTKPV CCCCCCCCCCCHHHHHHCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA