Click here to switch to the map view.

The map label for this gene is 113476767

Identifier: 113476767

GI number: 113476767

Start: 4962813

End: 4963391

Strand: Reverse

Name: 113476767

Synonym: Tery_3240

Alternate gene names: NA

Gene position: 4963391-4962813 (Counterclockwise)

Preceding gene: 113476768

Following gene: 113476766

Centisome position: 64.04

GC content: 31.95

Gene sequence:

>579_bases
ATGACTATTGAATTAACTGAAAGAGCAAAACAATTAATTCCTAAAGCTAAAATAGTTAGCTTTAAAAGTTGGGAGAAAGT
TCTACCAACAGAAATAATTCAACTTTTTCAAATAGCTGATGGTGAAGCTCGTTATCTCACAGATAATGATTTAAACTCAC
TCAAAAATAGTTCAAAATTACCAATTTTTTCGATTGAAGCTGCTAGTTTGCTCAAAGATTCAGCATCAAAAATTGTTGAT
AAAGCGAGGGAAAAAGTATTAGCAACATATCCTAATATTACGGCAGAAGGAGGGGATTTATATCCACAGGCTCGAGCTGA
AGCATGTTGGCGAGATTTTTGGCATTTTTTACGTTGTATTACTTATGGAATTGCTGGTAATAATAAAGAGTTTACTAGTC
AAGAAGGGCTACATTATATGAATTTACTTTATCAAGAATTGCTTGTGCCACTATCAGCAATGGTGTGTGGTTTAGAAGCT
ATTAAAACTGCTAGCTTGAAAAATTTTTCTTCTGAACAACAAGCAGAATTAGTTCCTTATTTTGACCATTTAGTAACAAA
TTTGAAAAAGTTTTCTTAA

Upstream 100 bases:

>100_bases
CTGTGTATTATTAACAATTTCTAGGACTCATAGTATCAGTAACATCAAAAATATAAACTACCCAGTGGAGTAACCAAAAA
ACTGAAAACTGATTACTGAA

Downstream 100 bases:

>100_bases
TGGAATTGAGCTTGGATAGAAAAGAAAATTCTTCTTTGTTATTTGATTATGCTTTTGTATCTTTATTCAAGGTAAAACGA
TTAATATTTTCGTCTTTTTT

Product: phycobilisome protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTIELTERAKQLIPKAKIVSFKSWEKVLPTEIIQLFQIADGEARYLTDNDLNSLKNSSKLPIFSIEAASLLKDSASKIVD
KAREKVLATYPNITAEGGDLYPQARAEACWRDFWHFLRCITYGIAGNNKEFTSQEGLHYMNLLYQELLVPLSAMVCGLEA
IKTASLKNFSSEQQAELVPYFDHLVTNLKKFS

Sequences:

>Translated_192_residues
MTIELTERAKQLIPKAKIVSFKSWEKVLPTEIIQLFQIADGEARYLTDNDLNSLKNSSKLPIFSIEAASLLKDSASKIVD
KAREKVLATYPNITAEGGDLYPQARAEACWRDFWHFLRCITYGIAGNNKEFTSQEGLHYMNLLYQELLVPLSAMVCGLEA
IKTASLKNFSSEQQAELVPYFDHLVTNLKKFS
>Mature_191_residues
TIELTERAKQLIPKAKIVSFKSWEKVLPTEIIQLFQIADGEARYLTDNDLNSLKNSSKLPIFSIEAASLLKDSASKIVDK
AREKVLATYPNITAEGGDLYPQARAEACWRDFWHFLRCITYGIAGNNKEFTSQEGLHYMNLLYQELLVPLSAMVCGLEAI
KTASLKNFSSEQQAELVPYFDHLVTNLKKFS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the core of the phycobilisome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 21711; Mature: 21580

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIELTERAKQLIPKAKIVSFKSWEKVLPTEIIQLFQIADGEARYLTDNDLNSLKNSSKL
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCC
PIFSIEAASLLKDSASKIVDKAREKVLATYPNITAEGGDLYPQARAEACWRDFWHFLRCI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TYGIAGNNKEFTSQEGLHYMNLLYQELLVPLSAMVCGLEAIKTASLKNFSSEQQAELVPY
HHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FDHLVTNLKKFS
HHHHHHHHHHCC
>Mature Secondary Structure 
TIELTERAKQLIPKAKIVSFKSWEKVLPTEIIQLFQIADGEARYLTDNDLNSLKNSSKL
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCC
PIFSIEAASLLKDSASKIVDKAREKVLATYPNITAEGGDLYPQARAEACWRDFWHFLRCI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TYGIAGNNKEFTSQEGLHYMNLLYQELLVPLSAMVCGLEAIKTASLKNFSSEQQAELVPY
HHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FDHLVTNLKKFS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA