| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mgtA [H]
Identifier: 113476717
GI number: 113476717
Start: 4857113
End: 4858342
Strand: Reverse
Name: mgtA [H]
Synonym: Tery_3180
Alternate gene names: 113476717
Gene position: 4858342-4857113 (Counterclockwise)
Preceding gene: 113476720
Following gene: 113476716
Centisome position: 62.69
GC content: 30.33
Gene sequence:
>1230_bases ATGTTTATGAAAATTGCTATTATTGCCTCTGGATTTTTACCTGTATTAGATGGAGTAACCGTCAGTGGTTATTACCGAGT TCAAAAACTTAGTCAATTCGGACATCAAGTTTTATTATTTTGCCCAGACTATAGTCCCCTTGCTCACTTATATCCCAATT GGAAGGATTATACTGGTAATATTTTCCCAGGAATTCAAGTCATTAACTTACCTAGTACACCATTTCTAGATTTTGAAAGG AATGTGGGATTTAATACTTATAAAATAGTTGTTCGAGAGCTAGAAAAGTTTCAACCAGATATTATTCATGTAGATGAACC AGAAAGATTATTTTTTGCTTTTTTTCGTTTAGCTGGAATCAAATTTGCTAGAGAAAACAATATTCCCTGTATTTGTACTT TCAGAACTAACTTTTTAGAATATTTTGAAGATTTTTTGCCTTTACCAAAAGGCATTAACCTAATGTTACAGTTAATCTTT GAAAAAAGTTTTGTTTCAATTTACAACAAATACGATTTGACTTTAGTTTCTAGTACTATAACCCATCAAAAAATTATTGG CATGGGTATCAAAAATGCTATGTATATCAACTTTCATGGTTTTGATATAGAAAAATTTAATTCAGCTACAATAACAACCA ATTTTTGGGAACTAAATTATCAAATTCCTAACTTAAACAACAAAGTAAAAATAGTATTTTTAGGTAGATTAACCGAAGAT AAGGGCTGGAAATTTACCTTAGGTGCTTTTGTAAAACTTCAACAATTAGTAAATATAGAAAATGTTGCCATAATAATTGT TGGGGATGGTCCGATGCGTGAGGAAATATCAAACAGGTTATCTCAAGTAACAAATCATGTTTATTTATTAGGTAGAATAT CTCCCAAACATATACCTAATATTTTAAAAAATAGTAATTTTCATGTCACAGCTTCAGAAAAAGAAACTAGAGGTTTAACT GTATTAGAAGCATTTGCAGCAGGTATTCCAGTAGTTGCTCCTGAAGCAGGAGGAGTTACAGAAAATATTCAAAATGGTAG AAATGGCTTATTATTTACACCAGGAAATCAGGAAAGTTTTTGTGATAAATTGAAGCTCTTAATTGAAGATAGTAATTTAC GGAAAGAAATGGGTATTAATGGCAGGGAAACTATTTCAAAATATAGTTGGGATAATGCAGTAGCTAACTTAGTTAAAATT TGGCAAGAGCAAATTATACTCCAATCATAA
Upstream 100 bases:
>100_bases TAGAAAAATTAGCACTCATAATTAGGCTTATTAATAATGACTTAAATTAACTGAAACCTTAGATTTATTGCCTTCTTTTT TATTTATTTTTCCTTTATTT
Downstream 100 bases:
>100_bases GCATTCAGCTTTCGGCTATTAACTATCAGTTATCAGTTATCAGTTATCAGTTATTAACTCATTCTATTGAAAGAAGTAAT TAGTCTCCAAAGAGAATGAA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MFMKIAIIASGFLPVLDGVTVSGYYRVQKLSQFGHQVLLFCPDYSPLAHLYPNWKDYTGNIFPGIQVINLPSTPFLDFER NVGFNTYKIVVRELEKFQPDIIHVDEPERLFFAFFRLAGIKFARENNIPCICTFRTNFLEYFEDFLPLPKGINLMLQLIF EKSFVSIYNKYDLTLVSSTITHQKIIGMGIKNAMYINFHGFDIEKFNSATITTNFWELNYQIPNLNNKVKIVFLGRLTED KGWKFTLGAFVKLQQLVNIENVAIIIVGDGPMREEISNRLSQVTNHVYLLGRISPKHIPNILKNSNFHVTASEKETRGLT VLEAFAAGIPVVAPEAGGVTENIQNGRNGLLFTPGNQESFCDKLKLLIEDSNLRKEMGINGRETISKYSWDNAVANLVKI WQEQIILQS
Sequences:
>Translated_409_residues MFMKIAIIASGFLPVLDGVTVSGYYRVQKLSQFGHQVLLFCPDYSPLAHLYPNWKDYTGNIFPGIQVINLPSTPFLDFER NVGFNTYKIVVRELEKFQPDIIHVDEPERLFFAFFRLAGIKFARENNIPCICTFRTNFLEYFEDFLPLPKGINLMLQLIF EKSFVSIYNKYDLTLVSSTITHQKIIGMGIKNAMYINFHGFDIEKFNSATITTNFWELNYQIPNLNNKVKIVFLGRLTED KGWKFTLGAFVKLQQLVNIENVAIIIVGDGPMREEISNRLSQVTNHVYLLGRISPKHIPNILKNSNFHVTASEKETRGLT VLEAFAAGIPVVAPEAGGVTENIQNGRNGLLFTPGNQESFCDKLKLLIEDSNLRKEMGINGRETISKYSWDNAVANLVKI WQEQIILQS >Mature_409_residues MFMKIAIIASGFLPVLDGVTVSGYYRVQKLSQFGHQVLLFCPDYSPLAHLYPNWKDYTGNIFPGIQVINLPSTPFLDFER NVGFNTYKIVVRELEKFQPDIIHVDEPERLFFAFFRLAGIKFARENNIPCICTFRTNFLEYFEDFLPLPKGINLMLQLIF EKSFVSIYNKYDLTLVSSTITHQKIIGMGIKNAMYINFHGFDIEKFNSATITTNFWELNYQIPNLNNKVKIVFLGRLTED KGWKFTLGAFVKLQQLVNIENVAIIIVGDGPMREEISNRLSQVTNHVYLLGRISPKHIPNILKNSNFHVTASEKETRGLT VLEAFAAGIPVVAPEAGGVTENIQNGRNGLLFTPGNQESFCDKLKLLIEDSNLRKEMGINGRETISKYSWDNAVANLVKI WQEQIILQS
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 46636; Mature: 46636
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMKIAIIASGFLPVLDGVTVSGYYRVQKLSQFGHQVLLFCPDYSPLAHLYPNWKDYTGN CEEEEEEECCCCHHHHCCEEEEHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCC IFPGIQVINLPSTPFLDFERNVGFNTYKIVVRELEKFQPDIIHVDEPERLFFAFFRLAGI CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCE KFARENNIPCICTFRTNFLEYFEDFLPLPKGINLMLQLIFEKSFVSIYNKYDLTLVSSTI EEEECCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHH THQKIIGMGIKNAMYINFHGFDIEKFNSATITTNFWELNYQIPNLNNKVKIVFLGRLTED HHHHHHCCCCCCEEEEEEECCCHHHCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEECCC KGWKFTLGAFVKLQQLVNIENVAIIIVGDGPMREEISNRLSQVTNHVYLLGRISPKHIPN CCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHH ILKNSNFHVTASEKETRGLTVLEAFAAGIPVVAPEAGGVTENIQNGRNGLLFTPGNQESF HHCCCCEEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCHHHHCCCCCEEECCCCCHHH CDKLKLLIEDSNLRKEMGINGRETISKYSWDNAVANLVKIWQEQIILQS HHHHHEEEECCCCHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFMKIAIIASGFLPVLDGVTVSGYYRVQKLSQFGHQVLLFCPDYSPLAHLYPNWKDYTGN CEEEEEEECCCCHHHHCCEEEEHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCC IFPGIQVINLPSTPFLDFERNVGFNTYKIVVRELEKFQPDIIHVDEPERLFFAFFRLAGI CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCE KFARENNIPCICTFRTNFLEYFEDFLPLPKGINLMLQLIFEKSFVSIYNKYDLTLVSSTI EEEECCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHH THQKIIGMGIKNAMYINFHGFDIEKFNSATITTNFWELNYQIPNLNNKVKIVFLGRLTED HHHHHHCCCCCCEEEEEEECCCHHHCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEECCC KGWKFTLGAFVKLQQLVNIENVAIIIVGDGPMREEISNRLSQVTNHVYLLGRISPKHIPN CCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHH ILKNSNFHVTASEKETRGLTVLEAFAAGIPVVAPEAGGVTENIQNGRNGLLFTPGNQESF HHCCCCEEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCHHHHCCCCCEEECCCCCHHH CDKLKLLIEDSNLRKEMGINGRETISKYSWDNAVANLVKIWQEQIILQS HHHHHEEEECCCCHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10531370; 9634230; 12218036 [H]