The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476667

Identifier: 113476667

GI number: 113476667

Start: 4779572

End: 4780357

Strand: Reverse

Name: 113476667

Synonym: Tery_3123

Alternate gene names: NA

Gene position: 4780357-4779572 (Counterclockwise)

Preceding gene: 113476668

Following gene: 113476666

Centisome position: 61.68

GC content: 31.42

Gene sequence:

>786_bases
ATGATTTATCAAAATCGTAATCTCAGAATTAATAATATTAAAAGTTCTCCTTCGCGTCACTGTTATGGCATGGGTTTAGG
TATTATTATTCTGGATGAAATATATCCTGGTTTTCCTGGTGATACACGCAATGCTAGTGCTTACCCTTTTCCTATTCAAT
ATGAAATTGCTGAAGGTTTAGATGGGAAAAAATTACTTTTTCAAGAAGATAAATCTTCTTTCTTGTTACCTATTAAGATA
GCAGCTCAAAAACTGGAGAAAATTGGTTGTCGGGCGATCGCTGGAGAATGTGGTTATTTTGCTTATTTTCAGACAGAAAT
AGCTAATTGTGTTCAGATTCCGGTATTTATGTCTAGTTTATTACAAGTACCTTTAGCACAACAATTAATTAGACAAGATC
AAGTAGTAGGTATTATCGTCTTTTCTAAAACCATTATAACTAATGCTCATTTACAAGGAGTAGGAATTACTTCTAATAGT
AATTATATTATTGAAGGAATATTTGAAAATAATAATTGTTCAGAATTGACTGAACTCTATATGAATTCTAATCCTCTAGA
AAGAAATGCTGATTATGAAAAAATTGAGCAACAATTAACCCAATTTGCACTTGATTTTAAACAAAAACATCCCCAGATAG
GAGTTTTGCTATTAGAATGTTCGGGAATGCAACCTTTTGCCAGAGCTATTCAAGAAGCAATTAATCTTCCCGTTTTTAGT
TGGGGTACTTTATTAGATTATGCTTATTCTATTGTTGTTCATCGTGATTATTATGGACATATTTAG

Upstream 100 bases:

>100_bases
TTTGAAATACTGAGTTGAATATTTTTTTCATCCCCTTAAAAGAGGCAGGGCTATTTCATTCTATCTAAATCCTTAACTTA
CAATAATTTTAGGTTTATAT

Downstream 100 bases:

>100_bases
CCTGTTGTCTAAGTAAATAATGTTGTCTAAGTAAATAATAATGAACAATAAATTACAAGATATTAATTATTTATCGTCAA
AAAAGACAGTTATTTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIYQNRNLRINNIKSSPSRHCYGMGLGIIILDEIYPGFPGDTRNASAYPFPIQYEIAEGLDGKKLLFQEDKSSFLLPIKI
AAQKLEKIGCRAIAGECGYFAYFQTEIANCVQIPVFMSSLLQVPLAQQLIRQDQVVGIIVFSKTIITNAHLQGVGITSNS
NYIIEGIFENNNCSELTELYMNSNPLERNADYEKIEQQLTQFALDFKQKHPQIGVLLLECSGMQPFARAIQEAINLPVFS
WGTLLDYAYSIVVHRDYYGHI

Sequences:

>Translated_261_residues
MIYQNRNLRINNIKSSPSRHCYGMGLGIIILDEIYPGFPGDTRNASAYPFPIQYEIAEGLDGKKLLFQEDKSSFLLPIKI
AAQKLEKIGCRAIAGECGYFAYFQTEIANCVQIPVFMSSLLQVPLAQQLIRQDQVVGIIVFSKTIITNAHLQGVGITSNS
NYIIEGIFENNNCSELTELYMNSNPLERNADYEKIEQQLTQFALDFKQKHPQIGVLLLECSGMQPFARAIQEAINLPVFS
WGTLLDYAYSIVVHRDYYGHI
>Mature_261_residues
MIYQNRNLRINNIKSSPSRHCYGMGLGIIILDEIYPGFPGDTRNASAYPFPIQYEIAEGLDGKKLLFQEDKSSFLLPIKI
AAQKLEKIGCRAIAGECGYFAYFQTEIANCVQIPVFMSSLLQVPLAQQLIRQDQVVGIIVFSKTIITNAHLQGVGITSNS
NYIIEGIFENNNCSELTELYMNSNPLERNADYEKIEQQLTQFALDFKQKHPQIGVLLLECSGMQPFARAIQEAINLPVFS
WGTLLDYAYSIVVHRDYYGHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29457; Mature: 29457

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYQNRNLRINNIKSSPSRHCYGMGLGIIILDEIYPGFPGDTRNASAYPFPIQYEIAEGL
CCCCCCCEEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCC
DGKKLLFQEDKSSFLLPIKIAAQKLEKIGCRAIAGECGYFAYFQTEIANCVQIPVFMSSL
CCCEEEEECCCCCEEEEHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LQVPLAQQLIRQDQVVGIIVFSKTIITNAHLQGVGITSNSNYIIEGIFENNNCSELTELY
HCCHHHHHHHHCCCEEEEEEEEHHHHCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHH
MNSNPLERNADYEKIEQQLTQFALDFKQKHPQIGVLLLECSGMQPFARAIQEAINLPVFS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCC
WGTLLDYAYSIVVHRDYYGHI
HHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MIYQNRNLRINNIKSSPSRHCYGMGLGIIILDEIYPGFPGDTRNASAYPFPIQYEIAEGL
CCCCCCCEEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCC
DGKKLLFQEDKSSFLLPIKIAAQKLEKIGCRAIAGECGYFAYFQTEIANCVQIPVFMSSL
CCCEEEEECCCCCEEEEHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LQVPLAQQLIRQDQVVGIIVFSKTIITNAHLQGVGITSNSNYIIEGIFENNNCSELTELY
HCCHHHHHHHHCCCEEEEEEEEHHHHCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHH
MNSNPLERNADYEKIEQQLTQFALDFKQKHPQIGVLLLECSGMQPFARAIQEAINLPVFS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCC
WGTLLDYAYSIVVHRDYYGHI
HHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA