| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476656
Identifier: 113476656
GI number: 113476656
Start: 4763040
End: 4763267
Strand: Reverse
Name: 113476656
Synonym: Tery_3111
Alternate gene names: NA
Gene position: 4763267-4763040 (Counterclockwise)
Preceding gene: 113476657
Following gene: 113476644
Centisome position: 61.46
GC content: 43.42
Gene sequence:
>228_bases GTGATTAGGCAGCATGGCAACTGTAAAGCCCTACCCGCCCCCAGAGATGAGAACCTCAGAGGAGTTCGTCAAATAGGACG GCAAAAATGGAAGCATGAAAGTGGATACCATAGACGCTCTCTATCTGAAACCACTATGTTTAGGTTCAAAGTTTTATTTA GTGGGAAGTTACGAAGACGATCATTTGATATCAAGCAGTGGAGTTATTCATTCAATGCGCTATCCTGA
Upstream 100 bases:
>100_bases TAGATGGAGTAGAAGGTGAAATAGCCCAAGTTTCAGGTGATGGGGCTGATGACAAATACAAGTGCTATGAAACAGCTCAC CAAAGAGGCGTAAAAATGCT
Downstream 100 bases:
>100_bases ACCCCATGATACAGAATGGTAAACCCGAAAGTTATCAAGTACACCTGCATCTCTCCAGGGAGTCATCTGCGATCGCAACA TTCATGCAACAAAGCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRRSFDIKQWSYSFNALS
Sequences:
>Translated_75_residues MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRRSFDIKQWSYSFNALS >Mature_75_residues MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRRSFDIKQWSYSFNALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8997; Mature: 8997
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCC SFDIKQWSYSFNALS CCCCCCCCCCCCCCC >Mature Secondary Structure MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCC SFDIKQWSYSFNALS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA