| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is plsY [H]
Identifier: 113476637
GI number: 113476637
Start: 4742285
End: 4742875
Strand: Reverse
Name: plsY [H]
Synonym: Tery_3089
Alternate gene names: 113476637
Gene position: 4742875-4742285 (Counterclockwise)
Preceding gene: 113476642
Following gene: 113476635
Centisome position: 61.2
GC content: 36.21
Gene sequence:
>591_bases TTGTCACGATCGCATAGAAAAAATGTCAGTCATGTAGCAGGATGTATACTACACATAAAGACATTGGTAGTATGTAAAGA TGCCAGCGCTCATTGCTATATTGATATTTTCAAGGGGGTATTAGCGATCGCTTTGGTTCGCTATATTTACTCTCTAGTGT TTGACCAAAACCTAACTATTGTTGCTGGAGTAACTGACATTAATATAGCAAAAGAATGGATGGTTATTTTAACAGGATTA ATTGCTATAGTAGGTCATACTAAATCTATTTGGATTGGTTTTAAGGGTGGCAAGCCTGTTGCTTCTAGTCTGGGTATTTT GTTAGCAATGTCTTGGGTTGTTGGTTTAGGAACACTTTCTGTATTTATTGTTGTTCTGATGATTAGTCGTATTGTTTCTT TGAGTTCTATTATCGCTGCTATTACTGTTTCTGGTTTAATGTTTTTGACAGGTCAATCACTTCCTTATAGAACCCCTGAG TGTATCTTTTTTTGCCGTTCAGGCGATCGCCAATCTCTTAAGCATAAGTCTAACAAAACAAAGATTAATCTTGGTGGTGG CATTCTCAAGAGTTCCCATCAATTTTTTTGA
Upstream 100 bases:
>100_bases TTGTGCCACACGCTTATTGTTACCATATTTTCTATCTTTATACAACAAAGCCCAGGCATGGCATAAAACTTTAAGGTAGT GCGATTGCGCCTCCGTTCCG
Downstream 100 bases:
>100_bases CTAAACTCTTACATCTTTCCATCCAAGAATTAGTTCTTTCAATGACCCATCTGATTAAACCCCCCTTTGTCCCTGCTTCT TCTTCGAGGGCTTTCGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTIVAGVTDINIAKEWMVILTGL IAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLSVFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPE CIFFCRSGDRQSLKHKSNKTKINLGGGILKSSHQFF
Sequences:
>Translated_196_residues MSRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTIVAGVTDINIAKEWMVILTGL IAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLSVFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPE CIFFCRSGDRQSLKHKSNKTKINLGGGILKSSHQFF >Mature_195_residues SRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTIVAGVTDINIAKEWMVILTGLI AIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLSVFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPEC IFFCRSGDRQSLKHKSNKTKINLGGGILKSSHQFF
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003811 [H]
Pfam domain/function: PF02660 DUF205 [H]
EC number: NA
Molecular weight: Translated: 21292; Mature: 21161
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTI CCCCHHCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VAGVTDINIAKEWMVILTGLIAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLS EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPECIFFCRSGDRQSLKHKSNKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCC KINLGGGILKSSHQFF EEEECCCCCCCCCCCC >Mature Secondary Structure SRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTI CCCHHCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VAGVTDINIAKEWMVILTGLIAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLS EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPECIFFCRSGDRQSLKHKSNKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCC KINLGGGILKSSHQFF EEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA