| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476627
Identifier: 113476627
GI number: 113476627
Start: 4729568
End: 4729690
Strand: Reverse
Name: 113476627
Synonym: Tery_3072
Alternate gene names: NA
Gene position: 4729690-4729568 (Counterclockwise)
Preceding gene: 113476635
Following gene: 113476624
Centisome position: 61.03
GC content: 34.15
Gene sequence:
>123_bases TTGCGTCAAAGAATTTCTCGGTTGGTCAGAAAGACTTTATCCTTTTCTAAAAAGCTAGAAAACCATCTAGGAGCTATTTG GTATTTCATTAATCATTATAATGAAGCGATCGCTTCACTGTAA
Upstream 100 bases:
>100_bases CATCAAACTTTTCCCAGGCCAGTAATTAACGTAAAATACATATCAGGTATACATTATACCCTTTTTTTTACTATTTTTTC ACTAAAGTCCCGATAATACT
Downstream 100 bases:
>100_bases TTTTATCACTACATATACAGGACTACCCCCACATTACTTGAAGACGACGCTCATTCACAGCATCTACAGACCAATTTGCT CGAACTAGAAAATGCCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL
Sequences:
>Translated_40_residues MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL >Mature_40_residues MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4806; Mature: 4806
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA