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The map label for this gene is rpmC

Identifier: 113476571

GI number: 113476571

Start: 4653896

End: 4654144

Strand: Reverse

Name: rpmC

Synonym: Tery_3004

Alternate gene names: 113476571

Gene position: 4654144-4653896 (Counterclockwise)

Preceding gene: 113476572

Following gene: 113476570

Centisome position: 60.05

GC content: 36.55

Gene sequence:

>249_bases
ATGCCTTTCCCAAAAATAGCAGAAGTTAGGGAATTGAGTGATGAAGAAATTGCTAATGAAATAGCTAAGGTTAAGCGGGA
ATTGTTTGATTTACGCATCCTTAAAGCTACAGGAAGAATAGAAAAAACACACCTATTCAAGCATAACCGCCATCGACTGG
CTCAGTTATTAACAATAGAAAAAGAACGGGAATTAGCTAAAAATGCAGAAGCTTCTACTACTGTTTCCACAGTAGAGAAT
ACTCAGTAA

Upstream 100 bases:

>100_bases
GGGCGGAGTGGTAGAAGAAATAGCTCGTGAAGCTATGCGTTTGGCATCATTTAAGTTGCCAATAAAGACAAGGTTCATTG
TACGTGAGGAGGATTAGTCT

Downstream 100 bases:

>100_bases
GCATTAAAATTTAAGATGGTGTTTCAGTTACTAGAATTTTAGTATTTTAGTAAAATATTAATTGCTAACACTATATAAAA
AAATTATCCTTCGGGTAACA

Product: 50S ribosomal protein L29P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MPFPKIAEVRELSDEEIANEIAKVKRELFDLRILKATGRIEKTHLFKHNRHRLAQLLTIEKERELAKNAEASTTVSTVEN
TQ

Sequences:

>Translated_82_residues
MPFPKIAEVRELSDEEIANEIAKVKRELFDLRILKATGRIEKTHLFKHNRHRLAQLLTIEKERELAKNAEASTTVSTVEN
TQ
>Mature_81_residues
PFPKIAEVRELSDEEIANEIAKVKRELFDLRILKATGRIEKTHLFKHNRHRLAQLLTIEKERELAKNAEASTTVSTVENT
Q

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_TRIEI (Q110B5)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722632.1
- ProteinModelPortal:   Q110B5
- SMR:   Q110B5
- STRING:   Q110B5
- GeneID:   4244888
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_3004
- NMPDR:   fig|203124.1.peg.5498
- eggNOG:   COG0255
- HOGENOM:   HBG730819
- OMA:   NTHRFKE
- BioCyc:   TERY203124:TERY_3004-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 9496; Mature: 9365

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPKIAEVRELSDEEIANEIAKVKRELFDLRILKATGRIEKTHLFKHNRHRLAQLLTIE
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KERELAKNAEASTTVSTVENTQ
HHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
PFPKIAEVRELSDEEIANEIAKVKRELFDLRILKATGRIEKTHLFKHNRHRLAQLLTIE
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KERELAKNAEASTTVSTVENTQ
HHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA