| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476131
Identifier: 113476131
GI number: 113476131
Start: 3880533
End: 3880886
Strand: Direct
Name: 113476131
Synonym: Tery_2513
Alternate gene names: NA
Gene position: 3880533-3880886 (Clockwise)
Preceding gene: 113476130
Following gene: 113476132
Centisome position: 50.07
GC content: 32.49
Gene sequence:
>354_bases GTGTACAATTTACCTCAACCTCCCTATCTTTTAATTGCAGTTGGTTTGCTGATGAGCTTGTCTTCAGGAGTAGTATTTGC TAGATTAATTAAGAAATTGGTTCAAGATTGGTCAGAAAATCCTGCTACTTGCAATATAGTTACCATGAGAGGATTAACAT TACAAATTCCTTATTTAGGTATTGCTAGTGGAGCATTAATTTTTTTATCCTCAAGCTTGCAGTTATTTGGATTTACTAAT TTAGTTGCTTATTCTATCTGTTTACCTTTAACTATAGGAACTGGGTTAGTTGTTTGGATTCAACTTACTAAAATTTTAGA TAAGATGGAACAGGGTATAAACGACAAGAATTGA
Upstream 100 bases:
>100_bases AAATCAATAAAACACTTTTCTACCTACTAACTCTCTTATTCAGCAGTCTTAATTACTACATAAATAATTAGTATAAATCA AGGAAACAAAGGAAACATTA
Downstream 100 bases:
>100_bases AATTTTCCCATCAACATTAGAATATTTTGAACATATATAGTACCCCTAAAATGGTTAGGAAATTCTTATCACTCTTAAGT TTAGTCCTTGCTCAAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MYNLPQPPYLLIAVGLLMSLSSGVVFARLIKKLVQDWSENPATCNIVTMRGLTLQIPYLGIASGALIFLSSSLQLFGFTN LVAYSICLPLTIGTGLVVWIQLTKILDKMEQGINDKN
Sequences:
>Translated_117_residues MYNLPQPPYLLIAVGLLMSLSSGVVFARLIKKLVQDWSENPATCNIVTMRGLTLQIPYLGIASGALIFLSSSLQLFGFTN LVAYSICLPLTIGTGLVVWIQLTKILDKMEQGINDKN >Mature_117_residues MYNLPQPPYLLIAVGLLMSLSSGVVFARLIKKLVQDWSENPATCNIVTMRGLTLQIPYLGIASGALIFLSSSLQLFGFTN LVAYSICLPLTIGTGLVVWIQLTKILDKMEQGINDKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12802; Mature: 12802
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLPQPPYLLIAVGLLMSLSSGVVFARLIKKLVQDWSENPATCNIVTMRGLTLQIPYLG CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCC IASGALIFLSSSLQLFGFTNLVAYSICLPLTIGTGLVVWIQLTKILDKMEQGINDKN HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYNLPQPPYLLIAVGLLMSLSSGVVFARLIKKLVQDWSENPATCNIVTMRGLTLQIPYLG CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCC IASGALIFLSSSLQLFGFTNLVAYSICLPLTIGTGLVVWIQLTKILDKMEQGINDKN HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA