Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476048

Identifier: 113476048

GI number: 113476048

Start: 3734100

End: 3734432

Strand: Direct

Name: 113476048

Synonym: Tery_2419

Alternate gene names: NA

Gene position: 3734100-3734432 (Clockwise)

Preceding gene: 113476047

Following gene: 113476049

Centisome position: 48.18

GC content: 36.34

Gene sequence:

>333_bases
GTGCTGGTAAAATGTAATTCTAGGGGGGTTATTAATGATGATATTGTCCCCTTTCCTTTGTCTGTGAAAAACTATAATGA
TTTGAGGGTAATTAATCGTTATCCGCGGATAATTTTTATTGTTGTGGTTGTGCCGGAAAAGGTGGAGGAATGGCTACTAA
AATCTGAATCATCTCTTTGTTTTCTAGGTTGTGGTTATTGGTTATCTTTGGCGGGTGCTGATGTGACGAAAAATCAGGAT
AATATTACTGTTTCAATTCGGAGAAAAAATATGTTTAATCCTCAAGTTTTAGAGGGAATTATGGAGAAGGTTTGGCAAGG
GGATATGTTATGA

Upstream 100 bases:

>100_bases
TGTTTTTCAAGGAACTACTCCCCCTTTAGATGGGTTGGGAATTGATTTAATTTTAACTTGATTAAAATCACGACTACCAG
AAAATTTTCCGATTCTTTAT

Downstream 100 bases:

>100_bases
ATTTTATTGTTAAAGATATTAATTTATTTAATAATATTCAGCGGGAAGTTGTGGCTAATTATTTGGAATAAGGAGGTTGG
AAGCAGCAAAGACTGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLVKCNSRGVINDDIVPFPLSVKNYNDLRVINRYPRIIFIVVVVPEKVEEWLLKSESSLCFLGCGYWLSLAGADVTKNQD
NITVSIRRKNMFNPQVLEGIMEKVWQGDML

Sequences:

>Translated_110_residues
MLVKCNSRGVINDDIVPFPLSVKNYNDLRVINRYPRIIFIVVVVPEKVEEWLLKSESSLCFLGCGYWLSLAGADVTKNQD
NITVSIRRKNMFNPQVLEGIMEKVWQGDML
>Mature_110_residues
MLVKCNSRGVINDDIVPFPLSVKNYNDLRVINRYPRIIFIVVVVPEKVEEWLLKSESSLCFLGCGYWLSLAGADVTKNQD
NITVSIRRKNMFNPQVLEGIMEKVWQGDML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12633; Mature: 12633

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKCNSRGVINDDIVPFPLSVKNYNDLRVINRYPRIIFIVVVVPEKVEEWLLKSESSLC
CEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHCCCCCEE
FLGCGYWLSLAGADVTKNQDNITVSIRRKNMFNPQVLEGIMEKVWQGDML
EEECCCEEHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLVKCNSRGVINDDIVPFPLSVKNYNDLRVINRYPRIIFIVVVVPEKVEEWLLKSESSLC
CEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHCCCCCEE
FLGCGYWLSLAGADVTKNQDNITVSIRRKNMFNPQVLEGIMEKVWQGDML
EEECCCEEHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA