Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is gvpN [H]

Identifier: 113475967

GI number: 113475967

Start: 3608132

End: 3609067

Strand: Direct

Name: gvpN [H]

Synonym: Tery_2334

Alternate gene names: 113475967

Gene position: 3608132-3609067 (Clockwise)

Preceding gene: 113475966

Following gene: 113475968

Centisome position: 46.56

GC content: 38.57

Gene sequence:

>936_bases
TTGACTACTGTACTTAATGTCTCACCTGATAGATTTGTTAGCACCCCTAGTGTTGAACGTGTAACTCAACGCGCTTCTCG
TTATTTAGAATCCGGTTACTCAGTTCACTTGCGCGGTCCCGCAGGAGTCGGTAAAACAACTCTCGCATTACACTTGGCTC
ATTTACGTCAGCAACCTATTTTTTTAATGATTGGGGATGATGAGTTTAAAACCTCAGATTTAATCGGTAATAAGTCAGGA
TATACAAGGAAAAAACTTGTAGATAATTACATCCACACTGTATTAAAAGTTGAAGATGAACTGAAGCATAATTGGATTGA
TTCTAGGTTAACCTTAGCTTGTAAGGAAGGCTTCACTCTGATTTATGACGAATTTAACCGCTCTCGTCCAGAGGTAAACA
ATGTTTTACTCTCTGTTTTAGAAGAAAAAATGTTGGTTTTACCACCTAGCCAAAATCAATCTGAATATATTCAGGTTCAT
CCCCAGTTTAGAGTAATCTTAACTTCCAACTCTGAGGAATGGACAGGAGTTCATGCAACTCAAGATGCTTTATTAGACAG
GGTGGTAACAATTGGCATGGGACAACCTGATATTTCGACTGAGCAGAATATCATCATACAGAAAACAGGAATAAACCCTC
TGAAAGCTGAAGTCATAATTAAGCTGGTGCGCAGTGTTCGCGAAAGATTAGAGACAGAAGATTTAGGTAGTTTGCGTTCT
GCTCTAATGATTTCTAAAGTTTGTCACGACCATGATATTCCTCTAGGTGGTAAAGATTCTAATTTTTCAGATCTTTGTGC
TGATATATTAATATCACGAGCTAATTTGCCTCGGCAGGAAGCCCTGAAGCAACTAGATGAAGTTCTAGAGGAACTTTTCC
CGGCTGATCAACTTTCAATTTCTGATATTGGGCTCAAAAAAGAGGGTAGTTTATGA

Upstream 100 bases:

>100_bases
GAGTTTGAACTATAACTTGCCCCTACTATCGTTAGTAACATTTTAGGGCTATTACAGTACTACATCTAAAAATATTTATA
CTTTAGGAGGAAATAATACT

Downstream 100 bases:

>100_bases
AGACAAGTGCTAATATAGCTAAATCAGCTGGTGGAGATAGTCTAGCAGATGTGCTCGAAAGAGTCTTGGATAAAGGAATC
GTAATTGCTGGAGATATTTC

Product: gas vesicle protein GvpN

Products: nitric oxide; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPIFLMIGDDEFKTSDLIGNKSG
YTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTLIYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVH
PQFRVILTSNSEEWTGVHATQDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS
ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSISDIGLKKEGSL

Sequences:

>Translated_311_residues
MTTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPIFLMIGDDEFKTSDLIGNKSG
YTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTLIYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVH
PQFRVILTSNSEEWTGVHATQDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS
ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSISDIGLKKEGSL
>Mature_310_residues
TTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPIFLMIGDDEFKTSDLIGNKSGY
TRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTLIYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVHP
QFRVILTSNSEEWTGVHATQDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRSA
LMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSISDIGLKKEGSL

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Vacuole, gas vesicle [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011704
- InterPro:   IPR013462 [H]

Pfam domain/function: PF07728 AAA_5 [H]

EC number: 1.7.99.7

Molecular weight: Translated: 34921; Mature: 34790

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPI
CCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCE
FLMIGDDEFKTSDLIGNKSGYTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTL
EEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCEE
IYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVHPQFRVILTSNSEEWTGVHAT
EEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCCHHH
QDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS
HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSI
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH
SDIGLKKEGSL
HHCCCCCCCCC
>Mature Secondary Structure 
TTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPI
CEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCE
FLMIGDDEFKTSDLIGNKSGYTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTL
EEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCEE
IYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVHPQFRVILTSNSEEWTGVHAT
EEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCCHHH
QDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS
HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSI
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH
SDIGLKKEGSL
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nitrous oxide; acceptor; H2O

Specific reaction: nitrous oxide + acceptor + H2O = 2 nitric oxide + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9063646 [H]