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The map label for this gene is 113475943

Identifier: 113475943

GI number: 113475943

Start: 3576309

End: 3576746

Strand: Direct

Name: 113475943

Synonym: Tery_2307

Alternate gene names: NA

Gene position: 3576309-3576746 (Clockwise)

Preceding gene: 113475942

Following gene: 113475944

Centisome position: 46.15

GC content: 35.16

Gene sequence:

>438_bases
TTGCCAATATCTAAAATTATTGAACTATGCCAATATCTAAAATTATTGAACTATAGACTAATTGGAAGTAGTGGAAACGA
CATATTAGTTGGTGGTAAAGGCAAAGATATTCTCACAGGTGGCAGTGGAGTCGATCGCTTCTTCTTTGAATCTCCCAAAG
ACGGCATAGACAAAATTACAGATTTTAACGCTTTAAACGAAACTATAGTCATTAACAGTCGCACATTCGACAGCTTGAAC
CCCGGTAAATTATTAAGTAACCAATTTTCTATTGGATCAAGAGATGCAAAAGCTACCACATCAGACCAAAGATTTATTTA
CACCACTGATGGGTCATTATTCTTCGATCCAGACGGAAAAGGTGGCATTGAACAAACTAAAATAACTGTTTTTGCTAATC
TTCCTTTTCTATCCAGCGATAACTTTGAAATTGTTTAA

Upstream 100 bases:

>100_bases
CCTTTATCTAGTCTAAAGTCTGGATATTATCTGTTTTTTTAGACTTATTTGCCCTCCCTGGGGAGATAGTTGTAAATTTT
CCTACTTACCTACTTAATCA

Downstream 100 bases:

>100_bases
AGTCCTACAAGAATTTAGCTTTGACCCCAAGTATAGCTAGGCCAGAACAGTGCCTAGACCTCATATGAATCTCAGCCATT
GCTTGTGCCCTAATTTCAAA

Product: hemolysin-type calcium-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPISKIIELCQYLKLLNYRLIGSSGNDILVGGKGKDILTGGSGVDRFFFESPKDGIDKITDFNALNETIVINSRTFDSLN
PGKLLSNQFSIGSRDAKATTSDQRFIYTTDGSLFFDPDGKGGIEQTKITVFANLPFLSSDNFEIV

Sequences:

>Translated_145_residues
MPISKIIELCQYLKLLNYRLIGSSGNDILVGGKGKDILTGGSGVDRFFFESPKDGIDKITDFNALNETIVINSRTFDSLN
PGKLLSNQFSIGSRDAKATTSDQRFIYTTDGSLFFDPDGKGGIEQTKITVFANLPFLSSDNFEIV
>Mature_144_residues
PISKIIELCQYLKLLNYRLIGSSGNDILVGGKGKDILTGGSGVDRFFFESPKDGIDKITDFNALNETIVINSRTFDSLNP
GKLLSNQFSIGSRDAKATTSDQRFIYTTDGSLFFDPDGKGGIEQTKITVFANLPFLSSDNFEIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15885; Mature: 15754

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISKIIELCQYLKLLNYRLIGSSGNDILVGGKGKDILTGGSGVDRFFFESPKDGIDKIT
CCHHHHHHHHHHHHHHCEEEECCCCCEEEECCCCCEEEECCCCCCHHCCCCCCCHHHHHH
DFNALNETIVINSRTFDSLNPGKLLSNQFSIGSRDAKATTSDQRFIYTTDGSLFFDPDGK
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCC
GGIEQTKITVFANLPFLSSDNFEIV
CCCCEEEEEEEEECCEECCCCEEEC
>Mature Secondary Structure 
PISKIIELCQYLKLLNYRLIGSSGNDILVGGKGKDILTGGSGVDRFFFESPKDGIDKIT
CHHHHHHHHHHHHHHCEEEECCCCCEEEECCCCCEEEECCCCCCHHCCCCCCCHHHHHH
DFNALNETIVINSRTFDSLNPGKLLSNQFSIGSRDAKATTSDQRFIYTTDGSLFFDPDGK
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCC
GGIEQTKITVFANLPFLSSDNFEIV
CCCCEEEEEEEEECCEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA