| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475929
Identifier: 113475929
GI number: 113475929
Start: 3564500
End: 3565069
Strand: Direct
Name: 113475929
Synonym: Tery_2293
Alternate gene names: NA
Gene position: 3564500-3565069 (Clockwise)
Preceding gene: 113475927
Following gene: 113475930
Centisome position: 45.99
GC content: 29.12
Gene sequence:
>570_bases ATGAAAGAAAGGGAATTATCTCGCTTATTAAAAAAACCATTCTATACAGTTATAAAGTATCTACACCAAAAAGATTTACC AAAAGAAGTAAAAAATGCTTTGAACGATATTTTTAATGTTTTAGAAATTGAACCAGACAATGATATTTCTAACAGACAGG AAGTTTATCAAAGCATTGCCAAATTTCTGCAAAAAAACTTGCCTCAACCAAGATCTGAACCTTTAAGAATTACCCAATGT TTAAGAATTACCTATAAACTTTGTAGAGAGTTTGACGAACAATTAGTAAAAGAAGGATCAGAAATTAACCCGACACTTCT CGAAGCCGCAAAAGCATTAATTTTAACTATTAAAGTAAATTATGAACCTAAAGTAAATTATGAACCTGAATTACTCAAAG TTCAAACTTATAATCGTCAAATAGAAATTTATTACATTAAAGAAAACAAACCAATAGTAACAAGAATAGAACAGGAATTA GATAGAGATAGTTTACCTGAAGATGTACGTTCAGAGTGGTTACGCGAGGGTGAAAAAAAATTAACTTTTAAACTTTATCC AAAGGAGTAA
Upstream 100 bases:
>100_bases TCATTAAATTCCCTACTTATGCCGACTATTCCCTACTGACAATAGAAAAAAAATGTGATGCAATAGAAGGATAGTAAAAA TTAAGTCACTAGGTTGATTT
Downstream 100 bases:
>100_bases AATTATGCCAATTCCACTATTTATGTGGGCTATAGCAGGTGCTTTAGGGGTTTCAGCAACTTTCGCATTAATATTTTGGG ATCAAATTTTAGGCTGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIAKFLQKNLPQPRSEPLRITQC LRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVNYEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQEL DRDSLPEDVRSEWLREGEKKLTFKLYPKE
Sequences:
>Translated_189_residues MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIAKFLQKNLPQPRSEPLRITQC LRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVNYEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQEL DRDSLPEDVRSEWLREGEKKLTFKLYPKE >Mature_189_residues MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIAKFLQKNLPQPRSEPLRITQC LRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVNYEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQEL DRDSLPEDVRSEWLREGEKKLTFKLYPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22626; Mature: 22626
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KFLQKNLPQPRSEPLRITQCLRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVN HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEC YEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQELDRDSLPEDVRSEWLREGEKK CCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCE LTFKLYPKE EEEEECCCC >Mature Secondary Structure MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KFLQKNLPQPRSEPLRITQCLRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVN HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEC YEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQELDRDSLPEDVRSEWLREGEKK CCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCE LTFKLYPKE EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA