| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475895
Identifier: 113475895
GI number: 113475895
Start: 3506525
End: 3507313
Strand: Direct
Name: 113475895
Synonym: Tery_2254
Alternate gene names: NA
Gene position: 3506525-3507313 (Clockwise)
Preceding gene: 113475892
Following gene: 113475896
Centisome position: 45.24
GC content: 30.93
Gene sequence:
>789_bases ATGTGTAGATTATTAGGTTATCTTGGTGAGCCAATCTTATTAGAGTCCATTCTTACTCAACCAAAACACTCGTTAATAGT CCAAAGTTATCAACCCCAAGAAATGCAAGAGTCATTACTAAATGCTGATGGATTTGGATTAGGTTGGTATGATACTCAAA AGCAGACTTCACCTTTTACTTATAAAAATACCCAACCTATTTGGAATGATATAAATCTTAAGAGTCTTGGTGGTTATATA GAGTCAGGCTGTATTCTAGGTTATGTTAGAAGTGCAACTCTTGGTCAAGGAATTGATATCAGTAACTGTCAGCCATTTAA TTACAAAAATATACTATTTATTCACAATGGCTATATTGATCAATTTCGATCTACTCTTTATAAACCCATACGGGATTCTC TCCAAGATATTCCATATTTATTGATTAACGGTAATACGGACTCTGAACATATTTTTGCTTTGTTAATTAATGAAGTTCTT GAAATAATTAAGTATAACTTTCAAGAAGCTTTACATAATATATTAATGTTTTTGAAAAAAATTGCTCAGGAAAATAAAGT CAAATTTTTGGCAAATACAATTATTACAGACGGACATCAATTAGTTGCTTCTAGATTTGCTCAAGAGGCAAGTTCACCTA GTCTTTATTGGTTAAAAAATTCTTCTAAATTTCCTAATTCTGTAATTATAGCTTCCGAACCTTTGTTTGCAGATGATTGG CAAAAGTTTCCAGAACAAAGTATCACTAAAGTCAGTGAAAATCTTGATATTCAGATCTATCAAATATGA
Upstream 100 bases:
>100_bases CTGAATTAGTTAAAAATGGATTGTATTGTTCATCAAAATGTTATGGTAATTAAATTACTAATATGTAGATGTATACTAAA ATCAAAAATCAAAAAATTAT
Downstream 100 bases:
>100_bases AAGAGAAATATGAGATATTTATCCCAAGAAAAATATCTCTATTTTAGATATTATATTTTAAGTGAAGTTAATTAATACAA TAACCCCGATACAAAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MCRLLGYLGEPILLESILTQPKHSLIVQSYQPQEMQESLLNADGFGLGWYDTQKQTSPFTYKNTQPIWNDINLKSLGGYI ESGCILGYVRSATLGQGIDISNCQPFNYKNILFIHNGYIDQFRSTLYKPIRDSLQDIPYLLINGNTDSEHIFALLINEVL EIIKYNFQEALHNILMFLKKIAQENKVKFLANTIITDGHQLVASRFAQEASSPSLYWLKNSSKFPNSVIIASEPLFADDW QKFPEQSITKVSENLDIQIYQI
Sequences:
>Translated_262_residues MCRLLGYLGEPILLESILTQPKHSLIVQSYQPQEMQESLLNADGFGLGWYDTQKQTSPFTYKNTQPIWNDINLKSLGGYI ESGCILGYVRSATLGQGIDISNCQPFNYKNILFIHNGYIDQFRSTLYKPIRDSLQDIPYLLINGNTDSEHIFALLINEVL EIIKYNFQEALHNILMFLKKIAQENKVKFLANTIITDGHQLVASRFAQEASSPSLYWLKNSSKFPNSVIIASEPLFADDW QKFPEQSITKVSENLDIQIYQI >Mature_262_residues MCRLLGYLGEPILLESILTQPKHSLIVQSYQPQEMQESLLNADGFGLGWYDTQKQTSPFTYKNTQPIWNDINLKSLGGYI ESGCILGYVRSATLGQGIDISNCQPFNYKNILFIHNGYIDQFRSTLYKPIRDSLQDIPYLLINGNTDSEHIFALLINEVL EIIKYNFQEALHNILMFLKKIAQENKVKFLANTIITDGHQLVASRFAQEASSPSLYWLKNSSKFPNSVIIASEPLFADDW QKFPEQSITKVSENLDIQIYQI
Specific function: Unknown
COG id: COG0121
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324138, Length=296, Percent_Identity=29.3918918918919, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017808 - InterPro: IPR017932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29953; Mature: 29953
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRLLGYLGEPILLESILTQPKHSLIVQSYQPQEMQESLLNADGFGLGWYDTQKQTSPFT CCCHHHHCCCHHHHHHHHCCCCHHHEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC YKNTQPIWNDINLKSLGGYIESGCILGYVRSATLGQGIDISNCQPFNYKNILFIHNGYID CCCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHH QFRSTLYKPIRDSLQDIPYLLINGNTDSEHIFALLINEVLEIIKYNFQEALHNILMFLKK HHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAQENKVKFLANTIITDGHQLVASRFAQEASSPSLYWLKNSSKFPNSVIIASEPLFADDW HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCHHHH QKFPEQSITKVSENLDIQIYQI HHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MCRLLGYLGEPILLESILTQPKHSLIVQSYQPQEMQESLLNADGFGLGWYDTQKQTSPFT CCCHHHHCCCHHHHHHHHCCCCHHHEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC YKNTQPIWNDINLKSLGGYIESGCILGYVRSATLGQGIDISNCQPFNYKNILFIHNGYID CCCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHH QFRSTLYKPIRDSLQDIPYLLINGNTDSEHIFALLINEVLEIIKYNFQEALHNILMFLKK HHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAQENKVKFLANTIITDGHQLVASRFAQEASSPSLYWLKNSSKFPNSVIIASEPLFADDW HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCHHHH QKFPEQSITKVSENLDIQIYQI HHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]