Click here to switch to the map view.

The map label for this gene is yisS [H]

Identifier: 113475856

GI number: 113475856

Start: 3451853

End: 3452887

Strand: Direct

Name: yisS [H]

Synonym: Tery_2215

Alternate gene names: 113475856

Gene position: 3451853-3452887 (Clockwise)

Preceding gene: 113475855

Following gene: 113475858

Centisome position: 44.54

GC content: 36.71

Gene sequence:

>1035_bases
ATGGAAATAGGAATTGCTATATTTGGTGCAGGTCGTTGGGGAGTTCACTTAGTTCGTAATTTTCTCAATCATCCTCATTC
TCGTGTTATTGCTATAGTAGATCCTCATGCAGAACACTTACAAGTAATTCAAAAACGCTTGCAATTGGACAAAGATATAG
CCTTAGTAGAAGATTGGATAGAAGCTTTAGAGTTACCAGGAATCTCAGCAGTCGCGATCGCCACACCAGCATCTACTCAC
TATGAGATTATTAGTGCTGCTCTCAAAAGAGGTTATCACGTTTTTTCCGAAAAACCTTTAACCCTTGAGTATTCTGAGTC
TATTGCACTATGCAAATTAGCAGACAAAAAAAAATTGCAACTATTTGTCGATCATACTTATTTATTTAATCCGGTCATAG
AAACTGGCAAAACTATAGTTAATCAAGGTAAATTAGGAGAATTACGCTACGGATATGCGACTCGAACTCATATTGAACCT
GTTCGCTCAGATGTTGATGCTCTCTGGGACTTAGCAATTCATGATATTTGTATTTTTAATAGCTGGTTACAGGAAACACC
AGTCGAAGTAGAAGCAAATGGTACAATTTGGCTTCCTCAAAAACCCCCACAATCAGATTTAGTTATGGCTAAACTGATTT
ATCCTAGTGGTTTTCAAGCTTTTTTACATCTTTGTTGGCTAAACCCTGATAAACAACGTCGTTTAGGAGTAGTAGGTAGT
CAAGGAACATTAATTTTTGATGAAACCTCAGAAACTCAACCTTTAGTTATTCAGCATGGTCATTTAGAATATTTGAGCAG
TCGTTGGAAAGCAGTAGATGTTGTTCCGGAGGTTATAAGCATCAAAAAAGCTGAACCTTTGGCTCAAGTGTGCCATGAAT
TTTTAAATTGTATTTTGACGAATACTACTTCAAAAATTTCTTCCGGTTGGGTAGGTGCTAAATTAGTAGAAATTCTCTGT
GCTTTGAATAATTCTCTTCAGCAACAAGGAAAAGCAATTCGATGTGACCAAGCTTACAGCGGATTTTATAATTAG

Upstream 100 bases:

>100_bases
CGTGAAATATTGAAGCTAGCTCTCAAGCTTATGCAATTCCTGCATAGGTAAATTTGGGAAAGCTTAATAGAACCGATATC
AAGTTACAAAGATTATAAAA

Downstream 100 bases:

>100_bases
ATTAAGTACTTGGACAAAATTAATTTAACATTTTTCAGAGAGTGGGTAGTAGGAAGTCGGGAGAAAGGGAAAAACATATT
TGATCAGTAGATCAAAAATA

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MEIGIAIFGAGRWGVHLVRNFLNHPHSRVIAIVDPHAEHLQVIQKRLQLDKDIALVEDWIEALELPGISAVAIATPASTH
YEIISAALKRGYHVFSEKPLTLEYSESIALCKLADKKKLQLFVDHTYLFNPVIETGKTIVNQGKLGELRYGYATRTHIEP
VRSDVDALWDLAIHDICIFNSWLQETPVEVEANGTIWLPQKPPQSDLVMAKLIYPSGFQAFLHLCWLNPDKQRRLGVVGS
QGTLIFDETSETQPLVIQHGHLEYLSSRWKAVDVVPEVISIKKAEPLAQVCHEFLNCILTNTTSKISSGWVGAKLVEILC
ALNNSLQQQGKAIRCDQAYSGFYN

Sequences:

>Translated_344_residues
MEIGIAIFGAGRWGVHLVRNFLNHPHSRVIAIVDPHAEHLQVIQKRLQLDKDIALVEDWIEALELPGISAVAIATPASTH
YEIISAALKRGYHVFSEKPLTLEYSESIALCKLADKKKLQLFVDHTYLFNPVIETGKTIVNQGKLGELRYGYATRTHIEP
VRSDVDALWDLAIHDICIFNSWLQETPVEVEANGTIWLPQKPPQSDLVMAKLIYPSGFQAFLHLCWLNPDKQRRLGVVGS
QGTLIFDETSETQPLVIQHGHLEYLSSRWKAVDVVPEVISIKKAEPLAQVCHEFLNCILTNTTSKISSGWVGAKLVEILC
ALNNSLQQQGKAIRCDQAYSGFYN
>Mature_344_residues
MEIGIAIFGAGRWGVHLVRNFLNHPHSRVIAIVDPHAEHLQVIQKRLQLDKDIALVEDWIEALELPGISAVAIATPASTH
YEIISAALKRGYHVFSEKPLTLEYSESIALCKLADKKKLQLFVDHTYLFNPVIETGKTIVNQGKLGELRYGYATRTHIEP
VRSDVDALWDLAIHDICIFNSWLQETPVEVEANGTIWLPQKPPQSDLVMAKLIYPSGFQAFLHLCWLNPDKQRRLGVVGS
QGTLIFDETSETQPLVIQHGHLEYLSSRWKAVDVVPEVISIKKAEPLAQVCHEFLNCILTNTTSKISSGWVGAKLVEILC
ALNNSLQQQGKAIRCDQAYSGFYN

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38548; Mature: 38548

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIGIAIFGAGRWGVHLVRNFLNHPHSRVIAIVDPHAEHLQVIQKRLQLDKDIALVEDWI
CCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH
EALELPGISAVAIATPASTHYEIISAALKRGYHVFSEKPLTLEYSESIALCKLADKKKLQ
HHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCCCEEEEECCCEEEEEECCCCEEE
LFVDHTYLFNPVIETGKTIVNQGKLGELRYGYATRTHIEPVRSDVDALWDLAIHDICIFN
EEEECHHHHHHHHHHCHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SWLQETPVEVEANGTIWLPQKPPQSDLVMAKLIYPSGFQAFLHLCWLNPDKQRRLGVVGS
HHHHCCCEEEECCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHEEEECC
QGTLIFDETSETQPLVIQHGHLEYLSSRWKAVDVVPEVISIKKAEPLAQVCHEFLNCILT
CCEEEEECCCCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
NTTSKISSGWVGAKLVEILCALNNSLQQQGKAIRCDQAYSGFYN
CCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCC
>Mature Secondary Structure
MEIGIAIFGAGRWGVHLVRNFLNHPHSRVIAIVDPHAEHLQVIQKRLQLDKDIALVEDWI
CCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH
EALELPGISAVAIATPASTHYEIISAALKRGYHVFSEKPLTLEYSESIALCKLADKKKLQ
HHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCCCEEEEECCCEEEEEECCCCEEE
LFVDHTYLFNPVIETGKTIVNQGKLGELRYGYATRTHIEPVRSDVDALWDLAIHDICIFN
EEEECHHHHHHHHHHCHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SWLQETPVEVEANGTIWLPQKPPQSDLVMAKLIYPSGFQAFLHLCWLNPDKQRRLGVVGS
HHHHCCCEEEECCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHEEEECC
QGTLIFDETSETQPLVIQHGHLEYLSSRWKAVDVVPEVISIKKAEPLAQVCHEFLNCILT
CCEEEEECCCCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
NTTSKISSGWVGAKLVEILCALNNSLQQQGKAIRCDQAYSGFYN
CCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]