| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475814
Identifier: 113475814
GI number: 113475814
Start: 3391278
End: 3392735
Strand: Direct
Name: 113475814
Synonym: Tery_2169
Alternate gene names: NA
Gene position: 3391278-3392735 (Clockwise)
Preceding gene: 113475813
Following gene: 113475821
Centisome position: 43.76
GC content: 36.21
Gene sequence:
>1458_bases ATGCCAATATTTGTTGATAACTTAAAGAAAAATAGAAAAATAGATGATATTCATTTAACCATAGCCATTGTAGGTTCTAG AAAGCTTGAACAGTTTGAAGAAGAATATATCAATCAAGGATGGGGTTTAATGTCCCCCAATCTGACCATATACGGTTTTG ATGCTGATCAAGACGCGTGCAAGAAAATGAACACAAAGCTGCAAGAACAACAAATCAGCCATCAAGAAAAACACATACCC TTGGCTCTTTGGGATTCTGTAGAAACTGCTACTTTGCACATTACTAAATTCCCTGCTTGTAGTTCTTTGTACCCTCCAAG TCAGTCATATATTGATCGCTTTATTGGAAATTCCCCACTTATGGAATTAGCATCCACCCAAGAGATTCAAACAACAACTT TAGATGATTTTTGTCATTCTGAGGAAATCAGTGAAATTGATTTTATACAAATTGATACTCAAGGAGCAGAACTCAAAATT TTAGAAGGTGCTAAGGAAATTTTAAAAAGTGTTTTGTCACTAAATGTAGAGGTAGAATTTACGAGTCTCTATGATAATCA ACCTTTGTTTGGGGATGTTGACTTGTATCTGAGGAAAAAAGGCTTTACCCTATTTGATTTTGGAACTTTGTATCGAGATT CCCGTCGCAGAAGTTCCATATGTTCTCAAGAGCATCCCGGTCAATTAATATGGACAGATGCTTTTTACTTTCAGGATTTG ATCCAAAAGTCATCCGCTCAGGAATCGTGTAATAAGACTCCAGAAAAGCTGTTAAAGTTAGCTTGTATTGCCGATATCCT AAAATTTCCTGACGTAGCAATGGAAGCCCTGGAGTGCTTAACTTGGAAGTATGGTGATAATCCTAAGTACAATTTTGCCA ACAACATAGCAGAGGTTTTATCCCAATTCCACAATTTGGCTAAGGAGGGAGTGGGCGCTTTACCAGCGATGGAAAGAATC AAAGGTTATCTCAATAGTAAGTATTTTTTAAATCAGCCAGTGGTTAAAGAAGACGAGCTACATTCAAGGTTAAAATTCAG ACAATTTAATCTGATAATTTTCCCAGACTGGACGCAACCAGAAGAAACAGTGGGATTAGAATTACAAAAAGTAATTAAAA GTCTAGTGACTCATCCAGATAGAGCTAAGATGACTTTATTAATAGATAACAGCAATATTACTGCTGAAGATGCAGATTTA ATTTTATCTAGCGTGGCAATGAACTTGTTAATGGAGGAAGAATTAGAGGTAGATGAGGGACCAGAAATTGTTTTAGTTGG GGAGTTGAGTCAAGTGCAGTGGTCTGCTTTAATACCTCAGTTGCAAAGTAGGATTAAATTGGAACATGAGAATGGGGAAG CGATCGCTCAAATTAAAGCAGAAAATATTCCTATTATTGAACTCAATAACTTGGCAAGAAAAAGTTTTTGTATTCATAAA ACCGTTGATTTCACCTGA
Upstream 100 bases:
>100_bases CGATCGCTTCTGCAAAAGCAAGTCATATTACTGCTCTAAGTCTGAATGATTTAGCTAATAGTTAAAGTAAAAAAACTGAA CAAAAGAGGAAATTTTAAGG
Downstream 100 bases:
>100_bases CAAAATGCTCAATTGTCGACCGTCTCGTAAATAGCGATCGAGTATTTAAGAATTTAGTCAAAATTAGTCCTGACCAACTT TTGTCTAAAAGATACTTCCT
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Family Protein; Methyltransferase FkbM; Glycosyl Transferase Group 1 Family Protein; Methyltransferase FkbM Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MPIFVDNLKKNRKIDDIHLTIAIVGSRKLEQFEEEYINQGWGLMSPNLTIYGFDADQDACKKMNTKLQEQQISHQEKHIP LALWDSVETATLHITKFPACSSLYPPSQSYIDRFIGNSPLMELASTQEIQTTTLDDFCHSEEISEIDFIQIDTQGAELKI LEGAKEILKSVLSLNVEVEFTSLYDNQPLFGDVDLYLRKKGFTLFDFGTLYRDSRRRSSICSQEHPGQLIWTDAFYFQDL IQKSSAQESCNKTPEKLLKLACIADILKFPDVAMEALECLTWKYGDNPKYNFANNIAEVLSQFHNLAKEGVGALPAMERI KGYLNSKYFLNQPVVKEDELHSRLKFRQFNLIIFPDWTQPEETVGLELQKVIKSLVTHPDRAKMTLLIDNSNITAEDADL ILSSVAMNLLMEEELEVDEGPEIVLVGELSQVQWSALIPQLQSRIKLEHENGEAIAQIKAENIPIIELNNLARKSFCIHK TVDFT
Sequences:
>Translated_485_residues MPIFVDNLKKNRKIDDIHLTIAIVGSRKLEQFEEEYINQGWGLMSPNLTIYGFDADQDACKKMNTKLQEQQISHQEKHIP LALWDSVETATLHITKFPACSSLYPPSQSYIDRFIGNSPLMELASTQEIQTTTLDDFCHSEEISEIDFIQIDTQGAELKI LEGAKEILKSVLSLNVEVEFTSLYDNQPLFGDVDLYLRKKGFTLFDFGTLYRDSRRRSSICSQEHPGQLIWTDAFYFQDL IQKSSAQESCNKTPEKLLKLACIADILKFPDVAMEALECLTWKYGDNPKYNFANNIAEVLSQFHNLAKEGVGALPAMERI KGYLNSKYFLNQPVVKEDELHSRLKFRQFNLIIFPDWTQPEETVGLELQKVIKSLVTHPDRAKMTLLIDNSNITAEDADL ILSSVAMNLLMEEELEVDEGPEIVLVGELSQVQWSALIPQLQSRIKLEHENGEAIAQIKAENIPIIELNNLARKSFCIHK TVDFT >Mature_484_residues PIFVDNLKKNRKIDDIHLTIAIVGSRKLEQFEEEYINQGWGLMSPNLTIYGFDADQDACKKMNTKLQEQQISHQEKHIPL ALWDSVETATLHITKFPACSSLYPPSQSYIDRFIGNSPLMELASTQEIQTTTLDDFCHSEEISEIDFIQIDTQGAELKIL EGAKEILKSVLSLNVEVEFTSLYDNQPLFGDVDLYLRKKGFTLFDFGTLYRDSRRRSSICSQEHPGQLIWTDAFYFQDLI QKSSAQESCNKTPEKLLKLACIADILKFPDVAMEALECLTWKYGDNPKYNFANNIAEVLSQFHNLAKEGVGALPAMERIK GYLNSKYFLNQPVVKEDELHSRLKFRQFNLIIFPDWTQPEETVGLELQKVIKSLVTHPDRAKMTLLIDNSNITAEDADLI LSSVAMNLLMEEELEVDEGPEIVLVGELSQVQWSALIPQLQSRIKLEHENGEAIAQIKAENIPIIELNNLARKSFCIHKT VDFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55300; Mature: 55169
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFVDNLKKNRKIDDIHLTIAIVGSRKLEQFEEEYINQGWGLMSPNLTIYGFDADQDAC CCEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHH KKMNTKLQEQQISHQEKHIPLALWDSVETATLHITKFPACSSLYPPSQSYIDRFIGNSPL HHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCHH MELASTQEIQTTTLDDFCHSEEISEIDFIQIDTQGAELKILEGAKEILKSVLSLNVEVEF HHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCEEEEE TSLYDNQPLFGDVDLYLRKKGFTLFDFGTLYRDSRRRSSICSQEHPGQLIWTDAFYFQDL EEECCCCCCEECCEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH IQKSSAQESCNKTPEKLLKLACIADILKFPDVAMEALECLTWKYGDNPKYNFANNIAEVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SQFHNLAKEGVGALPAMERIKGYLNSKYFLNQPVVKEDELHSRLKFRQFNLIIFPDWTQP HHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHEEEEEEEEECCCCCC EETVGLELQKVIKSLVTHPDRAKMTLLIDNSNITAEDADLILSSVAMNLLMEEELEVDEG HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PEIVLVGELSQVQWSALIPQLQSRIKLEHENGEAIAQIKAENIPIIELNNLARKSFCIHK CCEEEEECCCHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCEEEECCHHHHHEEEEE TVDFT ECCCC >Mature Secondary Structure PIFVDNLKKNRKIDDIHLTIAIVGSRKLEQFEEEYINQGWGLMSPNLTIYGFDADQDAC CEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHH KKMNTKLQEQQISHQEKHIPLALWDSVETATLHITKFPACSSLYPPSQSYIDRFIGNSPL HHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCHH MELASTQEIQTTTLDDFCHSEEISEIDFIQIDTQGAELKILEGAKEILKSVLSLNVEVEF HHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCEEEEE TSLYDNQPLFGDVDLYLRKKGFTLFDFGTLYRDSRRRSSICSQEHPGQLIWTDAFYFQDL EEECCCCCCEECCEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH IQKSSAQESCNKTPEKLLKLACIADILKFPDVAMEALECLTWKYGDNPKYNFANNIAEVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SQFHNLAKEGVGALPAMERIKGYLNSKYFLNQPVVKEDELHSRLKFRQFNLIIFPDWTQP HHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHEEEEEEEEECCCCCC EETVGLELQKVIKSLVTHPDRAKMTLLIDNSNITAEDADLILSSVAMNLLMEEELEVDEG HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PEIVLVGELSQVQWSALIPQLQSRIKLEHENGEAIAQIKAENIPIIELNNLARKSFCIHK CCEEEEECCCHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCEEEECCHHHHHEEEEE TVDFT ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA