Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475811

Identifier: 113475811

GI number: 113475811

Start: 3381769

End: 3382164

Strand: Direct

Name: 113475811

Synonym: Tery_2166

Alternate gene names: NA

Gene position: 3381769-3382164 (Clockwise)

Preceding gene: 113475810

Following gene: 113475813

Centisome position: 43.64

GC content: 43.94

Gene sequence:

>396_bases
ATGCAAGGAACAGAGAAAGAGTACATGGAAGCCCGTAAGCAGCGAAGTAAAACATTGAGAAGAATAATGTCCTTAGTCGG
GCTTATATCTTTTGGGAGTGCTGCTTTGTTTGGGATAGCGAATATGTTTAAAAGTGCTTTACAGGAGTCTCAAAAGGTAG
AAACGGACACAGTTGTTTCGGTAGAGGAGCAGCTGCAGAAAATAGCTCGGGGATATGAGGGTGTTTTGGAGCGAGAACCT
GAAAATGTGACCGCTTTGGAAGGGTTGGTTAAAGTAAGGTTGGAGATGGGGGATAGGAAAGGGGCGATCGCTCCTCTGGA
AAAATTGGTGGGGTTGTATCCTCACAAAGATGATTATAAAGTTGTATTGGAGCAGCTAAAGTTGGAGGTTGACTAA

Upstream 100 bases:

>100_bases
CTGGACAGTCGTGGGACAAGTAATAAATGCTGAGGAGGCGATCGCTTTTTGGTTCAAACTGGGAAAACTGGATAAGGTAG
ATGTTAAGAGTAGAATGCTA

Downstream 100 bases:

>100_bases
CATTAAAGATAATAATTAACTAATTTCTGATGTCTAGGTAGTAAATTTGAAGAAAATTTTATGATTTATAAAAAAGATAA
ATCTGATTGGTTATATTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MQGTEKEYMEARKQRSKTLRRIMSLVGLISFGSAALFGIANMFKSALQESQKVETDTVVSVEEQLQKIARGYEGVLEREP
ENVTALEGLVKVRLEMGDRKGAIAPLEKLVGLYPHKDDYKVVLEQLKLEVD

Sequences:

>Translated_131_residues
MQGTEKEYMEARKQRSKTLRRIMSLVGLISFGSAALFGIANMFKSALQESQKVETDTVVSVEEQLQKIARGYEGVLEREP
ENVTALEGLVKVRLEMGDRKGAIAPLEKLVGLYPHKDDYKVVLEQLKLEVD
>Mature_131_residues
MQGTEKEYMEARKQRSKTLRRIMSLVGLISFGSAALFGIANMFKSALQESQKVETDTVVSVEEQLQKIARGYEGVLEREP
ENVTALEGLVKVRLEMGDRKGAIAPLEKLVGLYPHKDDYKVVLEQLKLEVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14741; Mature: 14741

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGTEKEYMEARKQRSKTLRRIMSLVGLISFGSAALFGIANMFKSALQESQKVETDTVVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VEEQLQKIARGYEGVLEREPENVTALEGLVKVRLEMGDRKGAIAPLEKLVGLYPHKDDYK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH
VVLEQLKLEVD
HHHHHHHHCCC
>Mature Secondary Structure
MQGTEKEYMEARKQRSKTLRRIMSLVGLISFGSAALFGIANMFKSALQESQKVETDTVVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VEEQLQKIARGYEGVLEREPENVTALEGLVKVRLEMGDRKGAIAPLEKLVGLYPHKDDYK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH
VVLEQLKLEVD
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA