| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475810
Identifier: 113475810
GI number: 113475810
Start: 3378982
End: 3380412
Strand: Direct
Name: 113475810
Synonym: Tery_2165
Alternate gene names: NA
Gene position: 3378982-3380412 (Clockwise)
Preceding gene: 113475809
Following gene: 113475811
Centisome position: 43.6
GC content: 32.84
Gene sequence:
>1431_bases ATGCGATCGCGAACAACTAGAGAAGGTTCAGTAGGTTTATTAACTTTATTCGGACTGGGTTTGTTTGGTGCTTTAATGCT TTGGCTCAAAGGAGTAGAATTAGGCAAACGTAGTTATAAATTCATAGTTGAATTTGAAAGTGCATCTGGTATTGAGTTAG GTACATCAGTTAGATATCGAGGTATTGATGTTGGGCAAGTAGTAAAAATCAAACCAGGGTCAAATGGAGTAGATATTACC CTAGAAATTCAGCCAGAAGATTTAATTATTCCTCGTGATGTATACATTCAAGGCAATATATCTTCATTTATTGGAACTGC GCAAATAGATATTATTCCAAGAAATAGAATACCAGAATCAGAAATTTCTGCTACTGCCTTATCATCTAATTGCCCTGAAA TAATTATCTGTAATAATGACCGTTTACAAGGAGAGGCCGGAGTAGAAATGCAACAATTATTAAGGGCAGGAATACGTTTA ATTGACCTCTATAGTGACCCAGAGTTATTTAATAATGTGAAGATAATTGCTGAAAATACAGCTAATGCATCTGCTGAAGC TTCTAAGTTAGCGAAACAACTCTCTGATTTATCAGAAACTATTAAAAAAGAAATGAAAGGTTTAAGTCAATATCTAAGAG AAGATATTGATAATATAACAGGAATTATCCGCACAGAAGTGGGTAGTTTAACTCAAACATTAGAAGGAGAAATTGGAGGC TTAACTCAAACATTAGAAGGAGAAATTAGTGGTTTAACTAATACAGTAGAGAAAGACTTAGATAGTTTGACTAAAACCTT AGAAAAAGAAGTGAATGATATTTCTAATCAAGTAACTACTGTGACTGAAACCATGAAAGAATCTACAAAAAAAGTTTCTT CTGCCGCAGTCGCTTCAGCAAATTCTGTAGAAGAAGTAGCTAATCAATTTAGTTTAACAGTTGAGCAGATTAATGAAATT GTTAATACAAATCGTTCGACTCTAGTTGCAACTTTAAATAATATCGAAAAAACAACTGAAGAATTAGTAGGACTAGTGGC AAGTTTAAGTCCGATGATTGGTGAGTTAGAAAGAGGAGAATTTATTAGTAATTTAGAGATATTATCAGAAAATGCAGTAG AAACTTCTGCGAATTTACGAGATATTTCTACTGATTTAAACAGCCCAACAAACATAATTATGTTGCAACAAACATTAGAT TCAGCTAGAGCAACATTTGAAAATGTGCAGAAAATGTCATCAGATTTAGATGATATAACAGGGGATGAAAGATTTAGGAA AAGCCTCAAAAAAATTATTAATGGATTAGGTGATTTATTCTCTTCAACAAAGCAGTTAGAGAAGCAAACTCAGACGGCAA AAAATATTGAAAGTTTGTTGAAAGAGAGTAGCAGTTCAGAGATTAGTAAATTTACCAAAAGTTATGAGTAG
Upstream 100 bases:
>100_bases GACACGAATAGAAAATAAAGATGGATATTATACCATAAGTTGATTGATTATCAAGTAAAATTTTTAGGTTTCAATACAAT AAAAGTTGGTTGGGGAAATT
Downstream 100 bases:
>100_bases CTTTGAGGTTTTAGATGTGAATTTTTAGGTGGGGATAGAATGGAAATATTACTGTTTTTATTAACATAGTATTTCTATGC CGGAATGCTCCACAAATAGC
Product: methyl-accepting chemotaxis sensory transducer
Products: oxaloacetate; NH3; H2O2
Alternate protein names: Mammalian Cell Entry Related Domain Protein; Mammalian Cell Entry Related Domain-Containing Protein; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MRSRTTREGSVGLLTLFGLGLFGALMLWLKGVELGKRSYKFIVEFESASGIELGTSVRYRGIDVGQVVKIKPGSNGVDIT LEIQPEDLIIPRDVYIQGNISSFIGTAQIDIIPRNRIPESEISATALSSNCPEIIICNNDRLQGEAGVEMQQLLRAGIRL IDLYSDPELFNNVKIIAENTANASAEASKLAKQLSDLSETIKKEMKGLSQYLREDIDNITGIIRTEVGSLTQTLEGEIGG LTQTLEGEISGLTNTVEKDLDSLTKTLEKEVNDISNQVTTVTETMKESTKKVSSAAVASANSVEEVANQFSLTVEQINEI VNTNRSTLVATLNNIEKTTEELVGLVASLSPMIGELERGEFISNLEILSENAVETSANLRDISTDLNSPTNIIMLQQTLD SARATFENVQKMSSDLDDITGDERFRKSLKKIINGLGDLFSSTKQLEKQTQTAKNIESLLKESSSSEISKFTKSYE
Sequences:
>Translated_476_residues MRSRTTREGSVGLLTLFGLGLFGALMLWLKGVELGKRSYKFIVEFESASGIELGTSVRYRGIDVGQVVKIKPGSNGVDIT LEIQPEDLIIPRDVYIQGNISSFIGTAQIDIIPRNRIPESEISATALSSNCPEIIICNNDRLQGEAGVEMQQLLRAGIRL IDLYSDPELFNNVKIIAENTANASAEASKLAKQLSDLSETIKKEMKGLSQYLREDIDNITGIIRTEVGSLTQTLEGEIGG LTQTLEGEISGLTNTVEKDLDSLTKTLEKEVNDISNQVTTVTETMKESTKKVSSAAVASANSVEEVANQFSLTVEQINEI VNTNRSTLVATLNNIEKTTEELVGLVASLSPMIGELERGEFISNLEILSENAVETSANLRDISTDLNSPTNIIMLQQTLD SARATFENVQKMSSDLDDITGDERFRKSLKKIINGLGDLFSSTKQLEKQTQTAKNIESLLKESSSSEISKFTKSYE >Mature_476_residues MRSRTTREGSVGLLTLFGLGLFGALMLWLKGVELGKRSYKFIVEFESASGIELGTSVRYRGIDVGQVVKIKPGSNGVDIT LEIQPEDLIIPRDVYIQGNISSFIGTAQIDIIPRNRIPESEISATALSSNCPEIIICNNDRLQGEAGVEMQQLLRAGIRL IDLYSDPELFNNVKIIAENTANASAEASKLAKQLSDLSETIKKEMKGLSQYLREDIDNITGIIRTEVGSLTQTLEGEIGG LTQTLEGEISGLTNTVEKDLDSLTKTLEKEVNDISNQVTTVTETMKESTKKVSSAAVASANSVEEVANQFSLTVEQINEI VNTNRSTLVATLNNIEKTTEELVGLVASLSPMIGELERGEFISNLEILSENAVETSANLRDISTDLNSPTNIIMLQQTLD SARATFENVQKMSSDLDDITGDERFRKSLKKIINGLGDLFSSTKQLEKQTQTAKNIESLLKESSSSEISKFTKSYE
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.4.3.16
Molecular weight: Translated: 52047; Mature: 52047
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRTTREGSVGLLTLFGLGLFGALMLWLKGVELGKRSYKFIVEFESASGIELGTSVRYR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCEEE GIDVGQVVKIKPGSNGVDITLEIQPEDLIIPRDVYIQGNISSFIGTAQIDIIPRNRIPES CCCCCCEEEECCCCCCEEEEEEECCCCEECCCCEEEECCHHHHHCCEEEEEEECCCCCHH EISATALSSNCPEIIICNNDRLQGEAGVEMQQLLRAGIRLIDLYSDPELFNNVKIIAENT HHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHCCEEEEEECC ANASAEASKLAKQLSDLSETIKKEMKGLSQYLREDIDNITGIIRTEVGSLTQTLEGEIGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC LTQTLEGEISGLTNTVEKDLDSLTKTLEKEVNDISNQVTTVTETMKESTKKVSSAAVASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSVEEVANQFSLTVEQINEIVNTNRSTLVATLNNIEKTTEELVGLVASLSPMIGELERGE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH FISNLEILSENAVETSANLRDISTDLNSPTNIIMLQQTLDSARATFENVQKMSSDLDDIT HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC GDERFRKSLKKIINGLGDLFSSTKQLEKQTQTAKNIESLLKESSSSEISKFTKSYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MRSRTTREGSVGLLTLFGLGLFGALMLWLKGVELGKRSYKFIVEFESASGIELGTSVRYR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCEEE GIDVGQVVKIKPGSNGVDITLEIQPEDLIIPRDVYIQGNISSFIGTAQIDIIPRNRIPES CCCCCCEEEECCCCCCEEEEEEECCCCEECCCCEEEECCHHHHHCCEEEEEEECCCCCHH EISATALSSNCPEIIICNNDRLQGEAGVEMQQLLRAGIRLIDLYSDPELFNNVKIIAENT HHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHCCEEEEEECC ANASAEASKLAKQLSDLSETIKKEMKGLSQYLREDIDNITGIIRTEVGSLTQTLEGEIGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC LTQTLEGEISGLTNTVEKDLDSLTKTLEKEVNDISNQVTTVTETMKESTKKVSSAAVASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSVEEVANQFSLTVEQINEIVNTNRSTLVATLNNIEKTTEELVGLVASLSPMIGELERGE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH FISNLEILSENAVETSANLRDISTDLNSPTNIIMLQQTLDSARATFENVQKMSSDLDDIT HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC GDERFRKSLKKIINGLGDLFSSTKQLEKQTQTAKNIESLLKESSSSEISKFTKSYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate; H2O; O2
Specific reaction: L-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA