Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475802

Identifier: 113475802

GI number: 113475802

Start: 3366643

End: 3367347

Strand: Direct

Name: 113475802

Synonym: Tery_2156

Alternate gene names: NA

Gene position: 3366643-3367347 (Clockwise)

Preceding gene: 113475801

Following gene: 113475809

Centisome position: 43.44

GC content: 32.62

Gene sequence:

>705_bases
ATGATTAATGAGTATGTTGAGATAGCTAATTACTATGACAACGTATTGACAAGTGGATACTATGACTTTGATTCTCTTAG
CAATACTTTGTACAATTTACTTGGTGCTAGAAGAAAGATTTTAGATATTGGCGTAGGAACTGGGTTACTTACTGAAAAAA
TGCTTTCTTTGGCAAACTATAAGATTGTTGGTGTTGATTTTTCTTCCCGAATGTTGGAAATTGCTAAGAAAAGATTGGCA
ATTTCAGATGTTAAGTTGATTTGTCAAGATATGACAGAGTTTGAAACTGAGGAAAAGTTTGAAGCTATAGTTTCTACGGG
AGGTGTTATTGCTGCTGTGGAAGAAGAAGGAGAATATAGAATTTATAGTCATATAACTGATCCAGAACAAAATAAGCAGT
TGCTGGCAAAGTTACACAGTCAGTTAGATGATGGTGGATTATTAGCACTAGCAATTCAGGGACCTCATAATAATTATAAA
AAGGAAATTAAAGATGAGATTTTTTATGAGCAGAAAATCAAGAAAGAGGGAAGTTATGTGGATAAGTGGTATGTTTTTTC
TCAAGCTAATGGAGAAGTTCTTAAGGAACAATTTTGCCGTTTTTATTTTTTTGATGGAAAACAAACTAACCAAACTTTAA
TTGATGCTGGATTTCAGCAAGGATATCAGATTATTGATGGTAAGTTTTTGGTTAGTTACAAATAG

Upstream 100 bases:

>100_bases
TAGGAGAGCCAAAAAAACTACTGATAATCTATTTATTTAGGTTTTGATAAATATACCCATAAATTGGGTTGAGTTAAACA
TAATTGATGAGAATAAAGAA

Downstream 100 bases:

>100_bases
TCTGCTAATATCTATTTAAGATGTATATTAGAAAGTCATAATTTCAGTTATAATTTATCTGAATTATGATTTCTGTGAGA
TGGTATCAGTACTACTAAAA

Product: type 12 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MINEYVEIANYYDNVLTSGYYDFDSLSNTLYNLLGARRKILDIGVGTGLLTEKMLSLANYKIVGVDFSSRMLEIAKKRLA
ISDVKLICQDMTEFETEEKFEAIVSTGGVIAAVEEEGEYRIYSHITDPEQNKQLLAKLHSQLDDGGLLALAIQGPHNNYK
KEIKDEIFYEQKIKKEGSYVDKWYVFSQANGEVLKEQFCRFYFFDGKQTNQTLIDAGFQQGYQIIDGKFLVSYK

Sequences:

>Translated_234_residues
MINEYVEIANYYDNVLTSGYYDFDSLSNTLYNLLGARRKILDIGVGTGLLTEKMLSLANYKIVGVDFSSRMLEIAKKRLA
ISDVKLICQDMTEFETEEKFEAIVSTGGVIAAVEEEGEYRIYSHITDPEQNKQLLAKLHSQLDDGGLLALAIQGPHNNYK
KEIKDEIFYEQKIKKEGSYVDKWYVFSQANGEVLKEQFCRFYFFDGKQTNQTLIDAGFQQGYQIIDGKFLVSYK
>Mature_234_residues
MINEYVEIANYYDNVLTSGYYDFDSLSNTLYNLLGARRKILDIGVGTGLLTEKMLSLANYKIVGVDFSSRMLEIAKKRLA
ISDVKLICQDMTEFETEEKFEAIVSTGGVIAAVEEEGEYRIYSHITDPEQNKQLLAKLHSQLDDGGLLALAIQGPHNNYK
KEIKDEIFYEQKIKKEGSYVDKWYVFSQANGEVLKEQFCRFYFFDGKQTNQTLIDAGFQQGYQIIDGKFLVSYK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26784; Mature: 26784

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEYVEIANYYDNVLTSGYYDFDSLSNTLYNLLGARRKILDIGVGTGLLTEKMLSLANY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCE
KIVGVDFSSRMLEIAKKRLAISDVKLICQDMTEFETEEKFEAIVSTGGVIAAVEEEGEYR
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE
IYSHITDPEQNKQLLAKLHSQLDDGGLLALAIQGPHNNYKKEIKDEIFYEQKIKKEGSYV
EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEE
DKWYVFSQANGEVLKEQFCRFYFFDGKQTNQTLIDAGFQQGYQIIDGKFLVSYK
EEEEEEECCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCEEECCEEEEEEC
>Mature Secondary Structure
MINEYVEIANYYDNVLTSGYYDFDSLSNTLYNLLGARRKILDIGVGTGLLTEKMLSLANY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCE
KIVGVDFSSRMLEIAKKRLAISDVKLICQDMTEFETEEKFEAIVSTGGVIAAVEEEGEYR
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE
IYSHITDPEQNKQLLAKLHSQLDDGGLLALAIQGPHNNYKKEIKDEIFYEQKIKKEGSYV
EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEE
DKWYVFSQANGEVLKEQFCRFYFFDGKQTNQTLIDAGFQQGYQIIDGKFLVSYK
EEEEEEECCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA