| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475774
Identifier: 113475774
GI number: 113475774
Start: 3324038
End: 3324283
Strand: Direct
Name: 113475774
Synonym: Tery_2128
Alternate gene names: NA
Gene position: 3324038-3324283 (Clockwise)
Preceding gene: 113475771
Following gene: 113475776
Centisome position: 42.89
GC content: 27.24
Gene sequence:
>246_bases TTGCTCTACCAAAAATTTATTAAATTATTGAATATCTTTACCAAATCTTTACAACACCAACAGGTAAGGAAAGGAATATT ATCCATAAATTCCTCAAAAAAATATCTCATTCTAAAACTTACTTTAGTTGCCTTGGGAACTGCTATTTTTTTAACAACTT TAATTAAAATAGAACATTCTGCAAATTCTTTTTCCCTTGAACTTGCAGAAAAAATTGCTCAACTCAGAAATGCAGAAAAA TTTTAG
Upstream 100 bases:
>100_bases TTGAAACATAAATTTATTTGTGACAGGTTGTCACCTTAATATATAGTAATTAACATATCTCAAGGAATTAAATTTTCAGA CAGTAGCCATAAATCTGCTG
Downstream 100 bases:
>100_bases GGTGCTAACCTTTCAGATCTATATACCACTGAAAACCATCAAGAAAATGACCAAGAATAGGATCTTATTAAGCTACAGAC TAATTTAAAGCAAAAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLYQKFIKLLNIFTKSLQHQQVRKGILSINSSKKYLILKLTLVALGTAIFLTTLIKIEHSANSFSLELAEKIAQLRNAEK F
Sequences:
>Translated_81_residues MLYQKFIKLLNIFTKSLQHQQVRKGILSINSSKKYLILKLTLVALGTAIFLTTLIKIEHSANSFSLELAEKIAQLRNAEK F >Mature_81_residues MLYQKFIKLLNIFTKSLQHQQVRKGILSINSSKKYLILKLTLVALGTAIFLTTLIKIEHSANSFSLELAEKIAQLRNAEK F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9263; Mature: 9263
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYQKFIKLLNIFTKSLQHQQVRKGILSINSSKKYLILKLTLVALGTAIFLTTLIKIEHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ANSFSLELAEKIAQLRNAEKF CCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLYQKFIKLLNIFTKSLQHQQVRKGILSINSSKKYLILKLTLVALGTAIFLTTLIKIEHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ANSFSLELAEKIAQLRNAEKF CCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA