Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475769

Identifier: 113475769

GI number: 113475769

Start: 3317630

End: 3318853

Strand: Direct

Name: 113475769

Synonym: Tery_2122

Alternate gene names: NA

Gene position: 3317630-3318853 (Clockwise)

Preceding gene: 113475764

Following gene: 113475770

Centisome position: 42.81

GC content: 32.68

Gene sequence:

>1224_bases
ATGTTGCCAAACGACTTACTTTCTCATCGTCAAATTGGAGAAACAATCATTCCTCAAAAGCTAAAAATAGATGCCAAAAA
TTTAACTATTGCCATGGAAATGATTAATTGTTTCCAAGAAACATTGGGAAAAACCCAAGGAAAACTTGATAAACGTTTAC
AGTCAATTGAAGGGGATGACACTAATTATCGCTTTAAACGAGGATTAGCACATATTCTCAGAGGCAGTTTTTCTACTTTT
GAAATAATGAGTCCTCTTGAACCGATAGAATTAAGAAATCGTGTTTTTGCTATGGCAGCAGAAGTTGCTCCTAGTATTAG
AGCGACACAATTAACTTTAGAGAATTTAGCAACTAAATTAAGTCAGGAGTTAAACCAAGAAGTTGTACCTGATGAAATTA
AAAAAGGTCTCTATGCAGACTTACAAGAAAATCGAATTTTGACTCAATTTGATGCTCCTAAACCAGAAGATTTATTACAT
AGATATAACCTTTCTCAAGTTCAAGGTATTTTTTATAAAGCTAGTCATATTAAATTAAATGCTTATCGCAACGATCCAGG
AGAATATAAACTGTTATTTAGATATGTGAAATTATTTCAATTAATGACTTATATTGAAGGAGATGCCGACAAAGGTTTTA
CTCTTACAATAGACGGTCCCTATAGTTTATTTAAACCTAGCATTCGTTATGGTTTAGCATTAGCAAAAATGTTGCCGGCA
TTATTGCATGTTACTAAATGGAATTTACACGCAACTTTACAAAATCGTGACCCTTTTAGTGGAGCTTGGAAAACAGGTAT
ATTTAGTCTTAATTCTGATTGTGATTTAGTTAGTCATTATCCACCAGGAAAACCTTATGATAGTATGTTAGAAGCATCAT
TTGCAGAACGTTGGGCAAAGTTAAAAACTAAGTGGAAATTAGAAAGGGAAGTTGATTTAATTCCTATTCCTGGTAGTGTC
ATGATTCCTGATTTTAGACTAATTCATCCTAACGGAGTATCATATTTATTGGAAATAATTGGATATTGGCGACCAGAATA
TTTAAGAAAGAAATTTGCTCAGGTGCGTAGTGCTAAATGTGATAATTTAATATTGGCTATTTCTGAACGATTAAATTTAG
AAAAGGCGGGTGTAAATGTCAAAGATGTATCAGTGCCTATTGTGTGGTTTAAGAATAAGTTATTACCTAAGTCAGTGTTG
GAAATTTTAGACTCTATTGAGTAG

Upstream 100 bases:

>100_bases
CTGTTTATACTGATAATAATAATAATATTAAAGTAATTATATAATTATAAATATATACTTTATAATAAATGCTAAAATTT
TGTAATAAAAATCGTAAATT

Downstream 100 bases:

>100_bases
ATTATATAACCCTAAAGATAAGTCAAAATTTCTCTTTTTCAAGTTGATAAAATTAACATAATTCGATACTTTTAATTGTT
AAAAATATTAAGCACCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MLPNDLLSHRQIGETIIPQKLKIDAKNLTIAMEMINCFQETLGKTQGKLDKRLQSIEGDDTNYRFKRGLAHILRGSFSTF
EIMSPLEPIELRNRVFAMAAEVAPSIRATQLTLENLATKLSQELNQEVVPDEIKKGLYADLQENRILTQFDAPKPEDLLH
RYNLSQVQGIFYKASHIKLNAYRNDPGEYKLLFRYVKLFQLMTYIEGDADKGFTLTIDGPYSLFKPSIRYGLALAKMLPA
LLHVTKWNLHATLQNRDPFSGAWKTGIFSLNSDCDLVSHYPPGKPYDSMLEASFAERWAKLKTKWKLEREVDLIPIPGSV
MIPDFRLIHPNGVSYLLEIIGYWRPEYLRKKFAQVRSAKCDNLILAISERLNLEKAGVNVKDVSVPIVWFKNKLLPKSVL
EILDSIE

Sequences:

>Translated_407_residues
MLPNDLLSHRQIGETIIPQKLKIDAKNLTIAMEMINCFQETLGKTQGKLDKRLQSIEGDDTNYRFKRGLAHILRGSFSTF
EIMSPLEPIELRNRVFAMAAEVAPSIRATQLTLENLATKLSQELNQEVVPDEIKKGLYADLQENRILTQFDAPKPEDLLH
RYNLSQVQGIFYKASHIKLNAYRNDPGEYKLLFRYVKLFQLMTYIEGDADKGFTLTIDGPYSLFKPSIRYGLALAKMLPA
LLHVTKWNLHATLQNRDPFSGAWKTGIFSLNSDCDLVSHYPPGKPYDSMLEASFAERWAKLKTKWKLEREVDLIPIPGSV
MIPDFRLIHPNGVSYLLEIIGYWRPEYLRKKFAQVRSAKCDNLILAISERLNLEKAGVNVKDVSVPIVWFKNKLLPKSVL
EILDSIE
>Mature_407_residues
MLPNDLLSHRQIGETIIPQKLKIDAKNLTIAMEMINCFQETLGKTQGKLDKRLQSIEGDDTNYRFKRGLAHILRGSFSTF
EIMSPLEPIELRNRVFAMAAEVAPSIRATQLTLENLATKLSQELNQEVVPDEIKKGLYADLQENRILTQFDAPKPEDLLH
RYNLSQVQGIFYKASHIKLNAYRNDPGEYKLLFRYVKLFQLMTYIEGDADKGFTLTIDGPYSLFKPSIRYGLALAKMLPA
LLHVTKWNLHATLQNRDPFSGAWKTGIFSLNSDCDLVSHYPPGKPYDSMLEASFAERWAKLKTKWKLEREVDLIPIPGSV
MIPDFRLIHPNGVSYLLEIIGYWRPEYLRKKFAQVRSAKCDNLILAISERLNLEKAGVNVKDVSVPIVWFKNKLLPKSVL
EILDSIE

Specific function: Unknown

COG id: COG3372

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46596; Mature: 46596

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPNDLLSHRQIGETIIPQKLKIDAKNLTIAMEMINCFQETLGKTQGKLDKRLQSIEGDD
CCCHHHHHHHHHCHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TNYRFKRGLAHILRGSFSTFEIMSPLEPIELRNRVFAMAAEVAPSIRATQLTLENLATKL
CCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SQELNQEVVPDEIKKGLYADLQENRILTQFDAPKPEDLLHRYNLSQVQGIFYKASHIKLN
HHHHCCCCCCHHHHCCHHHHHHCCEEEEECCCCCHHHHHHHCCHHHHHHHEEEEEEEEEE
AYRNDPGEYKLLFRYVKLFQLMTYIEGDADKGFTLTIDGPYSLFKPSIRYGLALAKMLPA
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCHHHHHHHHHHHHHHH
LLHVTKWNLHATLQNRDPFSGAWKTGIFSLNSDCDLVSHYPPGKPYDSMLEASFAERWAK
HHHHHHCEEEEEECCCCCCCCCHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LKTKWKLEREVDLIPIPGSVMIPDFRLIHPNGVSYLLEIIGYWRPEYLRKKFAQVRSAKC
HHHHHEECCCCEEEECCCCEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DNLILAISERLNLEKAGVNVKDVSVPIVWFKNKLLPKSVLEILDSIE
CCCEEEHHHHCCHHHCCCCEEECEEEEEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLPNDLLSHRQIGETIIPQKLKIDAKNLTIAMEMINCFQETLGKTQGKLDKRLQSIEGDD
CCCHHHHHHHHHCHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TNYRFKRGLAHILRGSFSTFEIMSPLEPIELRNRVFAMAAEVAPSIRATQLTLENLATKL
CCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SQELNQEVVPDEIKKGLYADLQENRILTQFDAPKPEDLLHRYNLSQVQGIFYKASHIKLN
HHHHCCCCCCHHHHCCHHHHHHCCEEEEECCCCCHHHHHHHCCHHHHHHHEEEEEEEEEE
AYRNDPGEYKLLFRYVKLFQLMTYIEGDADKGFTLTIDGPYSLFKPSIRYGLALAKMLPA
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCHHHHHHHHHHHHHHH
LLHVTKWNLHATLQNRDPFSGAWKTGIFSLNSDCDLVSHYPPGKPYDSMLEASFAERWAK
HHHHHHCEEEEEECCCCCCCCCHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LKTKWKLEREVDLIPIPGSVMIPDFRLIHPNGVSYLLEIIGYWRPEYLRKKFAQVRSAKC
HHHHHEECCCCEEEECCCCEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DNLILAISERLNLEKAGVNVKDVSVPIVWFKNKLLPKSVLEILDSIE
CCCEEEHHHHCCHHHCCCCEEECEEEEEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA