| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475658
Identifier: 113475658
GI number: 113475658
Start: 3111592
End: 3111828
Strand: Direct
Name: 113475658
Synonym: Tery_1997
Alternate gene names: NA
Gene position: 3111592-3111828 (Clockwise)
Preceding gene: 113475657
Following gene: 113475659
Centisome position: 40.15
GC content: 34.6
Gene sequence:
>237_bases ATGACTCCCACAATGTTACGTCAGCTTTGGTCTATAATAGAAAACTCCCAAGCTACAATCTTAGTATCACTAGATGATGC TACCTTAGTTCAGTGGTTAATCAAACAGCTAAAAACAAGAACTGGCATAAACTGTAGAGATGCAGATTTAATGAATGAAT ATATTATCTCTCGATTATCCTTAATTCGGGATTTAGCTGAGGAACGTTTAGGAACTAAGACTTCACCATTATTATAA
Upstream 100 bases:
>100_bases CATTATGTATTCTATGCCTCAGGCTTCAGTAGTTGTTACTGATAACTAGAAATGCCAATCTCCTAAGCAAAAACGGGTAT TAAATTTATATGGAGGTTAT
Downstream 100 bases:
>100_bases TATCTATGTTGAGGTTGAAAGTCAAACTATAATAGACGAGACCTTGAAGGTAATTATAATAAGTAAACCTAATTAGCTAT TTTTACTATGCTGAACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTPTMLRQLWSIIENSQATILVSLDDATLVQWLIKQLKTRTGINCRDADLMNEYIISRLSLIRDLAEERLGTKTSPLL
Sequences:
>Translated_78_residues MTPTMLRQLWSIIENSQATILVSLDDATLVQWLIKQLKTRTGINCRDADLMNEYIISRLSLIRDLAEERLGTKTSPLL >Mature_77_residues TPTMLRQLWSIIENSQATILVSLDDATLVQWLIKQLKTRTGINCRDADLMNEYIISRLSLIRDLAEERLGTKTSPLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8931; Mature: 8799
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTMLRQLWSIIENSQATILVSLDDATLVQWLIKQLKTRTGINCRDADLMNEYIISRLS CCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LIRDLAEERLGTKTSPLL HHHHHHHHHCCCCCCCCC >Mature Secondary Structure TPTMLRQLWSIIENSQATILVSLDDATLVQWLIKQLKTRTGINCRDADLMNEYIISRLS CHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LIRDLAEERLGTKTSPLL HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA