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The map label for this gene is ywqD [H]

Identifier: 113475592

GI number: 113475592

Start: 2981514

End: 2983919

Strand: Direct

Name: ywqD [H]

Synonym: Tery_1925

Alternate gene names: 113475592

Gene position: 2981514-2983919 (Clockwise)

Preceding gene: 113475591

Following gene: 113475593

Centisome position: 38.47

GC content: 32.29

Gene sequence:

>2406_bases
ATGGAACAAAAAAAAACTTCTTGGTTATCTCTGTATAATAATCGGGATAAACCCTTGGATTCATCCCTAAGTTCTATTCC
TTACTCTTTACTTCCTAACCATATATATGAAGCTAAGTTTCATGGATCGGAAGAAAAACTATCTGAAAAAGAAAATAAGA
TTTGGAAATTAATATGTCATTGTTTTTTCTTGATTTTTAGTGTGACAACTACTACGACAACTGGAGCATATTTCTGGAGT
TTGAATCAGATTCCTATATATCAAGGAAAATTTCAAATATTGGTTGAAGGAGTTATGGTTAAGAATTCAGCTAATCATCA
ATTGACTATGGATAAAAAAATATTCGGCACAAATTTTGGAGAAGATTGGGAAAAACAGGCAACAAAAATTATGGATGGTC
AAGATGAAGATATAATGACTTCATATTCACATCAAAATATTATAAAAAATCCAGAGTTAAATAACTATAGCTTAGATTAT
AAATCACAAATTCAAGTGCTAAAAAGTCCGCATATTATGGAGTCAATAATTGCGGAAATTCAAAGGGAGTATCCAGAAAT
TAATTATAATTTTTTATTTAATAAGCCAAAAAATGTTTTTTTTACTCGGGAAAAAATTAGAATTCAAAGGTTAGGTGATA
CGAAAATTTTAGAAGTTAGCTATAATGACTCAGACAAAAATAAAATAAAGTTTGTATTAGATAAACTGGCGGAAGCTTAT
ATTAAATATGGTCGTGAATATAGTCAAAATAATACTGGTGAAGGGTTAAAGTTTGTTGAGGAACAAATTCCTAAATATCA
GCAAAAAATTAAAAAATTGCGACAGGAATTACAGGAGTTACAACAAGAGTATCTCTTTATTAATCCAGAAATTAAAAGTC
AAGAAATAGCAGCAGAAAGGAATCAAATTAAATCTCAAAAAATAGAAAATAAAATATTGCTTGGCCAACAGCGATCGCTC
TATACTATGTTGCAAGGTCAGTTGGGAATTAATCCTGAAGAAGCCTTGATAGCTTCAGCTTTAAGTCAAGCACAAAGATA
TCAATCATTATTAAGTAAATTGCAAAAACTGGAAATAACAATTGCTATGGAGTCAGCTCGCTTTAAAGAGAAAGCACCTC
AAATGCAAGTTTTATATAAAGAGCGAGAAAATTTACTTCCTTTGTTAAATGAAGAGGCCGAAAAAGTTATTGGCAGAGAT
ATAGAACAAGTAAATAAAAATGCTTTAGCTTTTCAAGACTCTATTCGCCTAGAATTAATTCATAAAATGATATTAGCTGC
AAATCAAATAGAGGTGATTGCAGTTAGAATTAAAGTCTTGGATGAGGCTGAAGCTAAATTAAATGAATACCAAGAAAAAA
TGCCAGAATTAGTAAGGCGCTACAGGGAAATTCAGGAAGAATTAGCAATATTAAATAAAAGGATTAAAAATTTATTAGAA
AAACAACAAATATTACAAATAGAAGTAGCTAATACAAAATTACCTTGGGAATTAATTGCTCCACCAGAATTGCTAAAAAC
TCAAAAAGGTGAGTTAGTAATAGTCTCTCCCAATATATTATTAAATATGGCTATGGGATTTTTAATAGGGTTAGTGCTGG
GAATATTATTAGCTCTGTTGGGAGAGAAATTTAAGCAAGATGTTTTTGAGACACCAAAAGAAGTAAAAAAGTCTCTTGGT
TTGCCTTTGTTGGGGGTCATTCCTATACATGAACAAAGAATGTGGATAAATGAAGAATTGAAAGAAAAGAAAAGTTCATC
TTTGGTTTTATATCCCTCAGTTTTTCAAGAAGCTTTTCGGACTTTAAATACTAATATTCGTCTACTAAATATCGAAAACC
CGATTAATTCTCTTGTAATTAGTTCTGCTTTACCAGGGGATGGTAAATCTACAGTAGCGGGTCATTTAGCTAGTGCTGCT
GCTGCTATGGGTCAACGAGTGTTATTAATAGATGCTGATGTACGTTGTCCACAAATTCATAATATGATGGGATTTTCAAA
CCAGGAGGGTTTAAGTAGTGTAATTACTGATGGTCTACTAATAGAAGCAGCAATTCAGCGATCGCCTGTGGATGAAAATC
TGTTTGTTTTAACTTCTGGACCTATTCCATCTGACCCAACAAAAATTTTGTCCTCAAGGCGAATGTCACAATTGATTCAA
GAGTCAGTAAATACTTTTGATTTAGTGATTTGTGATACTGCTCCATTATTGGGAAGAGCGGATGCTAATATATTGGCAGC
TTGTACTAATGGATTACTGTTAGTAGTGGGATTGGGCAAAACTGAGCGAGAGGCTTTAAGTTTAGCTCTGGATGATTTGA
GTATAGCAGGTGTGCCGATGTTGGGAATTGTGGGTAATGGCGATCGAGCTGATTCTTATTATCAGCGATATTATGATTAT
GACTAA

Upstream 100 bases:

>100_bases
TATCAATTGCTTTTTCCTCCTTTAAAGGTAATAAAACTGATGCTGACTGCTGAAAACTTAGGCAATAACTGAATTTTTAC
TTTTAACTTTAACTATAGAT

Downstream 100 bases:

>100_bases
ATTTATCCTCAATATGAAGAAATTAGGTGAGCTACCCGGTTTTGAACTTATGGGTGGTTATAATGATGGGCTATGGCTTC
ATTGGGGAGCTACTTACTCA

Product: protein-tyrosine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MEQKKTSWLSLYNNRDKPLDSSLSSIPYSLLPNHIYEAKFHGSEEKLSEKENKIWKLICHCFFLIFSVTTTTTTGAYFWS
LNQIPIYQGKFQILVEGVMVKNSANHQLTMDKKIFGTNFGEDWEKQATKIMDGQDEDIMTSYSHQNIIKNPELNNYSLDY
KSQIQVLKSPHIMESIIAEIQREYPEINYNFLFNKPKNVFFTREKIRIQRLGDTKILEVSYNDSDKNKIKFVLDKLAEAY
IKYGREYSQNNTGEGLKFVEEQIPKYQQKIKKLRQELQELQQEYLFINPEIKSQEIAAERNQIKSQKIENKILLGQQRSL
YTMLQGQLGINPEEALIASALSQAQRYQSLLSKLQKLEITIAMESARFKEKAPQMQVLYKERENLLPLLNEEAEKVIGRD
IEQVNKNALAFQDSIRLELIHKMILAANQIEVIAVRIKVLDEAEAKLNEYQEKMPELVRRYREIQEELAILNKRIKNLLE
KQQILQIEVANTKLPWELIAPPELLKTQKGELVIVSPNILLNMAMGFLIGLVLGILLALLGEKFKQDVFETPKEVKKSLG
LPLLGVIPIHEQRMWINEELKEKKSSSLVLYPSVFQEAFRTLNTNIRLLNIENPINSLVISSALPGDGKSTVAGHLASAA
AAMGQRVLLIDADVRCPQIHNMMGFSNQEGLSSVITDGLLIEAAIQRSPVDENLFVLTSGPIPSDPTKILSSRRMSQLIQ
ESVNTFDLVICDTAPLLGRADANILAACTNGLLLVVGLGKTEREALSLALDDLSIAGVPMLGIVGNGDRADSYYQRYYDY
D

Sequences:

>Translated_801_residues
MEQKKTSWLSLYNNRDKPLDSSLSSIPYSLLPNHIYEAKFHGSEEKLSEKENKIWKLICHCFFLIFSVTTTTTTGAYFWS
LNQIPIYQGKFQILVEGVMVKNSANHQLTMDKKIFGTNFGEDWEKQATKIMDGQDEDIMTSYSHQNIIKNPELNNYSLDY
KSQIQVLKSPHIMESIIAEIQREYPEINYNFLFNKPKNVFFTREKIRIQRLGDTKILEVSYNDSDKNKIKFVLDKLAEAY
IKYGREYSQNNTGEGLKFVEEQIPKYQQKIKKLRQELQELQQEYLFINPEIKSQEIAAERNQIKSQKIENKILLGQQRSL
YTMLQGQLGINPEEALIASALSQAQRYQSLLSKLQKLEITIAMESARFKEKAPQMQVLYKERENLLPLLNEEAEKVIGRD
IEQVNKNALAFQDSIRLELIHKMILAANQIEVIAVRIKVLDEAEAKLNEYQEKMPELVRRYREIQEELAILNKRIKNLLE
KQQILQIEVANTKLPWELIAPPELLKTQKGELVIVSPNILLNMAMGFLIGLVLGILLALLGEKFKQDVFETPKEVKKSLG
LPLLGVIPIHEQRMWINEELKEKKSSSLVLYPSVFQEAFRTLNTNIRLLNIENPINSLVISSALPGDGKSTVAGHLASAA
AAMGQRVLLIDADVRCPQIHNMMGFSNQEGLSSVITDGLLIEAAIQRSPVDENLFVLTSGPIPSDPTKILSSRRMSQLIQ
ESVNTFDLVICDTAPLLGRADANILAACTNGLLLVVGLGKTEREALSLALDDLSIAGVPMLGIVGNGDRADSYYQRYYDY
D
>Mature_801_residues
MEQKKTSWLSLYNNRDKPLDSSLSSIPYSLLPNHIYEAKFHGSEEKLSEKENKIWKLICHCFFLIFSVTTTTTTGAYFWS
LNQIPIYQGKFQILVEGVMVKNSANHQLTMDKKIFGTNFGEDWEKQATKIMDGQDEDIMTSYSHQNIIKNPELNNYSLDY
KSQIQVLKSPHIMESIIAEIQREYPEINYNFLFNKPKNVFFTREKIRIQRLGDTKILEVSYNDSDKNKIKFVLDKLAEAY
IKYGREYSQNNTGEGLKFVEEQIPKYQQKIKKLRQELQELQQEYLFINPEIKSQEIAAERNQIKSQKIENKILLGQQRSL
YTMLQGQLGINPEEALIASALSQAQRYQSLLSKLQKLEITIAMESARFKEKAPQMQVLYKERENLLPLLNEEAEKVIGRD
IEQVNKNALAFQDSIRLELIHKMILAANQIEVIAVRIKVLDEAEAKLNEYQEKMPELVRRYREIQEELAILNKRIKNLLE
KQQILQIEVANTKLPWELIAPPELLKTQKGELVIVSPNILLNMAMGFLIGLVLGILLALLGEKFKQDVFETPKEVKKSLG
LPLLGVIPIHEQRMWINEELKEKKSSSLVLYPSVFQEAFRTLNTNIRLLNIENPINSLVISSALPGDGKSTVAGHLASAA
AAMGQRVLLIDADVRCPQIHNMMGFSNQEGLSSVITDGLLIEAAIQRSPVDENLFVLTSGPIPSDPTKILSSRRMSQLIQ
ESVNTFDLVICDTAPLLGRADANILAACTNGLLLVVGLGKTEREALSLALDDLSIAGVPMLGIVGNGDRADSYYQRYYDY
D

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=374, Percent_Identity=27.807486631016, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87082032, Length=384, Percent_Identity=29.1666666666667, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 91130; Mature: 91130

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKKTSWLSLYNNRDKPLDSSLSSIPYSLLPNHIYEAKFHGSEEKLSEKENKIWKLICH
CCCCHHHHHHHHCCCCCCCCCHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
CFFLIFSVTTTTTTGAYFWSLNQIPIYQGKFQILVEGVMVKNSANHQLTMDKKIFGTNFG
HHHHHHHHHHCCCCCEEEEEECCCCEECCCCEEEEEEHHEECCCCCEEEECCHHHCCCCC
EDWEKQATKIMDGQDEDIMTSYSHQNIIKNPELNNYSLDYKSQIQVLKSPHIMESIIAEI
CHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
QREYPEINYNFLFNKPKNVFFTREKIRIQRLGDTKILEVSYNDSDKNKIKFVLDKLAEAY
HHHCCCCCEEEEECCCCCEEEEHHHHEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IKYGREYSQNNTGEGLKFVEEQIPKYQQKIKKLRQELQELQQEYLFINPEIKSQEIAAER
HHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
NQIKSQKIENKILLGQQRSLYTMLQGQLGINPEEALIASALSQAQRYQSLLSKLQKLEIT
HHHHHHHHHHHHEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IAMESARFKEKAPQMQVLYKERENLLPLLNEEAEKVIGRDIEQVNKNALAFQDSIRLELI
EEECHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHH
HKMILAANQIEVIAVRIKVLDEAEAKLNEYQEKMPELVRRYREIQEELAILNKRIKNLLE
HHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQQILQIEVANTKLPWELIAPPELLKTQKGELVIVSPNILLNMAMGFLIGLVLGILLALL
HHHEEEEEECCCCCCEEECCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
GEKFKQDVFETPKEVKKSLGLPLLGVIPIHEQRMWINEELKEKKSSSLVLYPSVFQEAFR
HHHHHHHHHCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
TLNTNIRLLNIENPINSLVISSALPGDGKSTVAGHLASAAAAMGQRVLLIDADVRCPQIH
HHCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHH
NMMGFSNQEGLSSVITDGLLIEAAIQRSPVDENLFVLTSGPIPSDPTKILSSRRMSQLIQ
HHCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
ESVNTFDLVICDTAPLLGRADANILAACTNGLLLVVGLGKTEREALSLALDDLSIAGVPM
HCCCCEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCE
LGIVGNGDRADSYYQRYYDYD
EEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MEQKKTSWLSLYNNRDKPLDSSLSSIPYSLLPNHIYEAKFHGSEEKLSEKENKIWKLICH
CCCCHHHHHHHHCCCCCCCCCHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
CFFLIFSVTTTTTTGAYFWSLNQIPIYQGKFQILVEGVMVKNSANHQLTMDKKIFGTNFG
HHHHHHHHHHCCCCCEEEEEECCCCEECCCCEEEEEEHHEECCCCCEEEECCHHHCCCCC
EDWEKQATKIMDGQDEDIMTSYSHQNIIKNPELNNYSLDYKSQIQVLKSPHIMESIIAEI
CHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
QREYPEINYNFLFNKPKNVFFTREKIRIQRLGDTKILEVSYNDSDKNKIKFVLDKLAEAY
HHHCCCCCEEEEECCCCCEEEEHHHHEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IKYGREYSQNNTGEGLKFVEEQIPKYQQKIKKLRQELQELQQEYLFINPEIKSQEIAAER
HHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
NQIKSQKIENKILLGQQRSLYTMLQGQLGINPEEALIASALSQAQRYQSLLSKLQKLEIT
HHHHHHHHHHHHEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IAMESARFKEKAPQMQVLYKERENLLPLLNEEAEKVIGRDIEQVNKNALAFQDSIRLELI
EEECHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHH
HKMILAANQIEVIAVRIKVLDEAEAKLNEYQEKMPELVRRYREIQEELAILNKRIKNLLE
HHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQQILQIEVANTKLPWELIAPPELLKTQKGELVIVSPNILLNMAMGFLIGLVLGILLALL
HHHEEEEEECCCCCCEEECCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
GEKFKQDVFETPKEVKKSLGLPLLGVIPIHEQRMWINEELKEKKSSSLVLYPSVFQEAFR
HHHHHHHHHCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
TLNTNIRLLNIENPINSLVISSALPGDGKSTVAGHLASAAAAMGQRVLLIDADVRCPQIH
HHCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHH
NMMGFSNQEGLSSVITDGLLIEAAIQRSPVDENLFVLTSGPIPSDPTKILSSRRMSQLIQ
HHCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
ESVNTFDLVICDTAPLLGRADANILAACTNGLLLVVGLGKTEREALSLALDDLSIAGVPM
HCCCCEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCE
LGIVGNGDRADSYYQRYYDYD
EEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]