Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475567

Identifier: 113475567

GI number: 113475567

Start: 2926396

End: 2927916

Strand: Direct

Name: 113475567

Synonym: Tery_1900

Alternate gene names: NA

Gene position: 2926396-2927916 (Clockwise)

Preceding gene: 113475566

Following gene: 113475569

Centisome position: 37.76

GC content: 38.07

Gene sequence:

>1521_bases
ATGATTAATGATAACAGCCAAAATCAGGAAACAAATTTTTGGATATGCAATGGAGAGGAAAAAAACCTGCCTCATCCCCC
GCAAATGCTTCATTACGGTGATGAGTGTCCTATTTGCCACAATGTCAAAAAAATCAAACGGAACCCACCTCCTCCAAACC
CAGACACCATTAATATTACTAGACCAACCGATTTTGAAGTACCCCCAGAGGTCGACACCAATAGTATTAAAGGTACTAGA
CCAACTGCTTCTCAAGTATCCCCAACAGGACAAAAGTCAAAACGCGACTGGCCTCTTGTTGGGGCACTTACGATTTTGAA
CCTGGGGAGTGCATTTACGACTGTTCGTGGTGCGTCGCAAATTCTCCCGAGTTTTGTCGCTTATCCTATGGGTATTACTA
TTCAGGGAGTGCTATTTGCCTTAATTGCTCGTTTATTCCTGAAACACGCCCCCTTAATTAAATGGGTAGTTGTAGGCTGC
TTTTCAACTTTTAGCGTTTACACTAGCTTTTTTGCTTACTATGATTTACTAAATCGAGAGACACGGGAAAAGACTCGTAT
TGAGCTAGCTAATTCTGGTCATCAAAGCTTAGTAGGAGAATTCTTTACCCCGATTCAAAATAAAGTTAATTCCTTGGAAA
GCGAGATAGGTATTATTAACAAAAAAATAGAGAAAGAAACTCAAGGAGAGAGGGGAGGAAGACCAAAAGGTTGTGGAAAA
GTGTGTCAGCAACTAAAAGAAGAAAGAGAAATACTCGAAGAACAAAAAGCTCAACTTAAACCATTAGTCAACCGCTTACA
GCCTTTATTTAACTACAATGTGGAAGGTAAGTCACCAAAAGAAATTTTTGACACTGACTTCAAAGCTTTATCTAAAGTTG
GGGAAAATTGTTTACCAAAAGAGCTGTTATCACAGCTAGAGATTACTTGTTTGCCCGATCAATATTTGAAGGCTTTAAAC
CCACAAAATTCTGAAAATTACGAAAGGCTAAGATTGACATACATCGATCCAGATCTAGAGGTTGATTTTCTTGCGCCCAT
TCTTAAAGTCATGAAAGGTGAAGGTTCTGCCATAGCATCTGTCATTATGGCTTTGCTAATTGATGGCTGTATCATTTTGT
TAGGAATTGGTGTTGAAATTCGCCCCCAGGTAACTCGTCAACGACAACAAACATTGACCTTGCAAATAAAAGATGGTAAA
ATTGTGGAGTTTTTAAACCTGTTACTATCGAAATCAGAAAATGAAACTATTGAAATAGAAAAAAGCGATAACAATAAAGA
TGAATACCAAAATTTGCTCACTTGGCTTTCTGTAAACACTCGATGGATTTGGCAAGATGAAGATAAAAGCTGGTACTTTC
GATCTTCCAGTAGTAAAGAGAATTTTCAGAAATGGTTGATAAATCAGATAAATTTGCAAAATCAGGCTCGGGCTAGTACG
AATTTATTGGAGTCCTGGAAGAAAAAGCCTCCAGAATATTTTGTGCTTGAGATGCCAATAGTTTCAAAAGATCAGGATTA
A

Upstream 100 bases:

>100_bases
CCATTATAAGAAGTGTAGCCAACAGGGTAACTAGGCTTTTTGTTCAGCTTTAAGGTAGTGCAAGTTAATAAAAACTTAGT
CAAATTGGAGTTTTTTTTAA

Downstream 100 bases:

>100_bases
GTTTGGCAGAGATTGCTTCCTACTTACTAAGGTACACTTGTGCGGGCAATATGCCCGCAATAGCAAGATAGAAGTTTTAA
TATCTGTACCTCATATACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MINDNSQNQETNFWICNGEEKNLPHPPQMLHYGDECPICHNVKKIKRNPPPPNPDTINITRPTDFEVPPEVDTNSIKGTR
PTASQVSPTGQKSKRDWPLVGALTILNLGSAFTTVRGASQILPSFVAYPMGITIQGVLFALIARLFLKHAPLIKWVVVGC
FSTFSVYTSFFAYYDLLNRETREKTRIELANSGHQSLVGEFFTPIQNKVNSLESEIGIINKKIEKETQGERGGRPKGCGK
VCQQLKEEREILEEQKAQLKPLVNRLQPLFNYNVEGKSPKEIFDTDFKALSKVGENCLPKELLSQLEITCLPDQYLKALN
PQNSENYERLRLTYIDPDLEVDFLAPILKVMKGEGSAIASVIMALLIDGCIILLGIGVEIRPQVTRQRQQTLTLQIKDGK
IVEFLNLLLSKSENETIEIEKSDNNKDEYQNLLTWLSVNTRWIWQDEDKSWYFRSSSSKENFQKWLINQINLQNQARAST
NLLESWKKKPPEYFVLEMPIVSKDQD

Sequences:

>Translated_506_residues
MINDNSQNQETNFWICNGEEKNLPHPPQMLHYGDECPICHNVKKIKRNPPPPNPDTINITRPTDFEVPPEVDTNSIKGTR
PTASQVSPTGQKSKRDWPLVGALTILNLGSAFTTVRGASQILPSFVAYPMGITIQGVLFALIARLFLKHAPLIKWVVVGC
FSTFSVYTSFFAYYDLLNRETREKTRIELANSGHQSLVGEFFTPIQNKVNSLESEIGIINKKIEKETQGERGGRPKGCGK
VCQQLKEEREILEEQKAQLKPLVNRLQPLFNYNVEGKSPKEIFDTDFKALSKVGENCLPKELLSQLEITCLPDQYLKALN
PQNSENYERLRLTYIDPDLEVDFLAPILKVMKGEGSAIASVIMALLIDGCIILLGIGVEIRPQVTRQRQQTLTLQIKDGK
IVEFLNLLLSKSENETIEIEKSDNNKDEYQNLLTWLSVNTRWIWQDEDKSWYFRSSSSKENFQKWLINQINLQNQARAST
NLLESWKKKPPEYFVLEMPIVSKDQD
>Mature_506_residues
MINDNSQNQETNFWICNGEEKNLPHPPQMLHYGDECPICHNVKKIKRNPPPPNPDTINITRPTDFEVPPEVDTNSIKGTR
PTASQVSPTGQKSKRDWPLVGALTILNLGSAFTTVRGASQILPSFVAYPMGITIQGVLFALIARLFLKHAPLIKWVVVGC
FSTFSVYTSFFAYYDLLNRETREKTRIELANSGHQSLVGEFFTPIQNKVNSLESEIGIINKKIEKETQGERGGRPKGCGK
VCQQLKEEREILEEQKAQLKPLVNRLQPLFNYNVEGKSPKEIFDTDFKALSKVGENCLPKELLSQLEITCLPDQYLKALN
PQNSENYERLRLTYIDPDLEVDFLAPILKVMKGEGSAIASVIMALLIDGCIILLGIGVEIRPQVTRQRQQTLTLQIKDGK
IVEFLNLLLSKSENETIEIEKSDNNKDEYQNLLTWLSVNTRWIWQDEDKSWYFRSSSSKENFQKWLINQINLQNQARAST
NLLESWKKKPPEYFVLEMPIVSKDQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57671; Mature: 57671

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDNSQNQETNFWICNGEEKNLPHPPQMLHYGDECPICHNVKKIKRNPPPPNPDTINIT
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE
RPTDFEVPPEVDTNSIKGTRPTASQVSPTGQKSKRDWPLVGALTILNLGSAFTTVRGASQ
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ILPSFVAYPMGITIQGVLFALIARLFLKHAPLIKWVVVGCFSTFSVYTSFFAYYDLLNRE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREKTRIELANSGHQSLVGEFFTPIQNKVNSLESEIGIINKKIEKETQGERGGRPKGCGK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VCQQLKEEREILEEQKAQLKPLVNRLQPLFNYNVEGKSPKEIFDTDFKALSKVGENCLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
ELLSQLEITCLPDQYLKALNPQNSENYERLRLTYIDPDLEVDFLAPILKVMKGEGSAIAS
HHHHHCCEEECCHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH
VIMALLIDGCIILLGIGVEIRPQVTRQRQQTLTLQIKDGKIVEFLNLLLSKSENETIEIE
HHHHHHHHHHHHHHCCCCEECHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEEE
KSDNNKDEYQNLLTWLSVNTRWIWQDEDKSWYFRSSSSKENFQKWLINQINLQNQARAST
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHH
NLLESWKKKPPEYFVLEMPIVSKDQD
HHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MINDNSQNQETNFWICNGEEKNLPHPPQMLHYGDECPICHNVKKIKRNPPPPNPDTINIT
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE
RPTDFEVPPEVDTNSIKGTRPTASQVSPTGQKSKRDWPLVGALTILNLGSAFTTVRGASQ
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ILPSFVAYPMGITIQGVLFALIARLFLKHAPLIKWVVVGCFSTFSVYTSFFAYYDLLNRE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREKTRIELANSGHQSLVGEFFTPIQNKVNSLESEIGIINKKIEKETQGERGGRPKGCGK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VCQQLKEEREILEEQKAQLKPLVNRLQPLFNYNVEGKSPKEIFDTDFKALSKVGENCLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
ELLSQLEITCLPDQYLKALNPQNSENYERLRLTYIDPDLEVDFLAPILKVMKGEGSAIAS
HHHHHCCEEECCHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH
VIMALLIDGCIILLGIGVEIRPQVTRQRQQTLTLQIKDGKIVEFLNLLLSKSENETIEIE
HHHHHHHHHHHHHHCCCCEECHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEEE
KSDNNKDEYQNLLTWLSVNTRWIWQDEDKSWYFRSSSSKENFQKWLINQINLQNQARAST
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHH
NLLESWKKKPPEYFVLEMPIVSKDQD
HHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA