| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475564
Identifier: 113475564
GI number: 113475564
Start: 2919566
End: 2921767
Strand: Direct
Name: 113475564
Synonym: Tery_1897
Alternate gene names: NA
Gene position: 2919566-2921767 (Clockwise)
Preceding gene: 113475563
Following gene: 113475565
Centisome position: 37.67
GC content: 35.47
Gene sequence:
>2202_bases ATGCCTGAAATTAATGACATCATTAATAATCGCAAAGCCAACGCTACTACTGCGATAAAAAAGAAGGAAGACTTAGAAGA ACTTGAGAGGAAAATTAAGGAGCTTCAGAGGTTAAGACCAGAAATTATTAAAGCACCTGGTATTACTTCTGTCGTCTCTG AGCGCTTAGAAAAAGTTGACCTTCAAGGCATCCTTGATATTATTACTCAAGAACGAGAGCTGTGGGGAAGGATTGAGAAA CGCCTGAATAGGGATACTATTAATATTGCTGTTGTGGGTTTAGCACGTCAAGGAAAAAGTACATTTCTACAGCAAATAAC TTTGTTGACAGATGCAGAAATTCCTGCCAGTGATGGTCAACCTTGCACTACTACTCAAAGCAATATTTATCATTCACCAA ACGAAAGTTATGGCAGAGTTTATTTTCATTCTAAAAGTTCTTTTTTGGAAGAAGTAATTATACCTTATTTCAAGAAATTA GGCTTTACAAGTTTCCCTCAAAGAATTGAAGATTTTGGTCGGGCACAACTACCATATTTACGAGAAAATTTTTCTGCTAA TGATCAGTCTATTTATAATCATCTAAAAGATGAGTATTACAGACACTTTTCTGACTATTCCCACCTACTAAAAAATGAAA AACATGTCCAGAAAATTAGACAAGATGAAATTAAGGAGTATGTTTCTCAAAAGTATGATTTGGCCAGTCAACCAACCCTT TTTCATCACTTAGCTGTGGAAAAGGTAGAGATTTTTTGCCCATTTCCAAATAGAGGAGTAGAAAAAATTGCTGTAATTGA TCTGCCTGGTCTTGGGGATACCCGGCTAGGGGATGCAGAACGAATGATTAAAGCCCTTGCGGAAGATACTGATTTTATTT TGTTTATTCGCAAGCCGAATGCTACTGGTGATTTCTGGGGACAACGAGATGTTGATTTGTATGATGCGGCACATCAAGCT TTGGAAGATAAATTACCTCTGGAACAGTGGTCTTTTATGCTACTTAATTATGATGGAGAAAATGGGAGAGCGTGTCAAGA TTTTCAAAATACGATTAAGTCTAAAGGAATTCATGTTAAGGAAGATCTTCAGTCTAACTGCAAGAATTCAACATCAGCGA AAGAAGTGTTAACAAAAATACTTACATATTTGGAAAGAAACCTAGTCAGATTAGACAAACAGTATATGTCGTCAACTTAT CAACAATCATTTAAGCGCCAACAGCAAGTGAAACTAGAACTACAAGGACTGGAGCAAGCAATAGCTAGTTATGGGGATAT CAATGCTCAGTATGTAGTGCTCAGAGATAAATTTGTGCTTCAACTTTACAATGATATAGAAAAGTTCCGAGAAGAAAAGC GAGAAGAATTGGACACTTCTAACCCAGAATTTAAAGCTGAGGTTGATGCAGCAATTAACCGGTGCCAACAAGAGTTTAAT ATTCCTGATTTAGAGCGTTTAAATAGTTGGGCAAGAAAAGATGGAATTAATGCTGTTTATTTTCGAGCTAAACAACAAAT GCGTCCGGGAATATTGAAGAATTTTCACTTAATGGAAACTGGTCTCAAAGCTGCGGTTGATCAGACAAAATTAGAATTAG CAAATATTCTAATTCAACTAGGAATTGGAAATATAGTGAAAGATAATGGACTGGAGTTTTTCCCTGCTATGGTAGAGATT TTGAACAAAAGTAGTAGTTTGCCGAATCTTAGGTTTGCCTTTGAATTTATTGATTCTTTTGAAGTTACTTATAAAGGAAT TATTCAATACCGAGTTTGGAAGGAGATTGTTGATATTTTACCTCCTAATACCATGACTTTTACTAAGGTATCAGATAATA TAAATAATGGTGATTTGTCTCCTAATACTATAGATTTTACTAAGGCATCAGATAATATGAATTTGGTTGTTCATGACCTT CAGAAACTCCATCAAAAAGCGATTGAAGTATGTGAAGAGATTTTAGATGATATAGGAATATACTTTAATAATGGACGAAT ATCAATGGTAGAAGAATTTGCAGATTACATTACACGTGCAGAAGGGGTACAGGGGGAATGGGACATTTTTTTGAGCAATA ACCGCAGTAAAGTTTGGCCAGAACTTAAGGAGATGGAAGAACAAGAGCAGTTACGAAAATATTGGCTGTCTTTAGTTCAA GAAGCACTGGCTATTAATGAACAAATTAAGCTCTCTTTTTGA
Upstream 100 bases:
>100_bases GGCGAATTTTTGCAACAGTTAGGAATCCATAATTTTCTCTGGTAAAACTAACTAAATTACAGTTTTTCTAGTTTTAAGAC AATAAATAAGATTAAAAACT
Downstream 100 bases:
>100_bases TAACTCGATTGATTTAAAGTGAGTTAAACTAGGCAAAATGTTAGCTATAAATTTAGTTGATTAAGCATATTGAGCAAAGT AACTTAGAACAAGTTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MPEINDIINNRKANATTAIKKKEDLEELERKIKELQRLRPEIIKAPGITSVVSERLEKVDLQGILDIITQERELWGRIEK RLNRDTINIAVVGLARQGKSTFLQQITLLTDAEIPASDGQPCTTTQSNIYHSPNESYGRVYFHSKSSFLEEVIIPYFKKL GFTSFPQRIEDFGRAQLPYLRENFSANDQSIYNHLKDEYYRHFSDYSHLLKNEKHVQKIRQDEIKEYVSQKYDLASQPTL FHHLAVEKVEIFCPFPNRGVEKIAVIDLPGLGDTRLGDAERMIKALAEDTDFILFIRKPNATGDFWGQRDVDLYDAAHQA LEDKLPLEQWSFMLLNYDGENGRACQDFQNTIKSKGIHVKEDLQSNCKNSTSAKEVLTKILTYLERNLVRLDKQYMSSTY QQSFKRQQQVKLELQGLEQAIASYGDINAQYVVLRDKFVLQLYNDIEKFREEKREELDTSNPEFKAEVDAAINRCQQEFN IPDLERLNSWARKDGINAVYFRAKQQMRPGILKNFHLMETGLKAAVDQTKLELANILIQLGIGNIVKDNGLEFFPAMVEI LNKSSSLPNLRFAFEFIDSFEVTYKGIIQYRVWKEIVDILPPNTMTFTKVSDNINNGDLSPNTIDFTKASDNMNLVVHDL QKLHQKAIEVCEEILDDIGIYFNNGRISMVEEFADYITRAEGVQGEWDIFLSNNRSKVWPELKEMEEQEQLRKYWLSLVQ EALAINEQIKLSF
Sequences:
>Translated_733_residues MPEINDIINNRKANATTAIKKKEDLEELERKIKELQRLRPEIIKAPGITSVVSERLEKVDLQGILDIITQERELWGRIEK RLNRDTINIAVVGLARQGKSTFLQQITLLTDAEIPASDGQPCTTTQSNIYHSPNESYGRVYFHSKSSFLEEVIIPYFKKL GFTSFPQRIEDFGRAQLPYLRENFSANDQSIYNHLKDEYYRHFSDYSHLLKNEKHVQKIRQDEIKEYVSQKYDLASQPTL FHHLAVEKVEIFCPFPNRGVEKIAVIDLPGLGDTRLGDAERMIKALAEDTDFILFIRKPNATGDFWGQRDVDLYDAAHQA LEDKLPLEQWSFMLLNYDGENGRACQDFQNTIKSKGIHVKEDLQSNCKNSTSAKEVLTKILTYLERNLVRLDKQYMSSTY QQSFKRQQQVKLELQGLEQAIASYGDINAQYVVLRDKFVLQLYNDIEKFREEKREELDTSNPEFKAEVDAAINRCQQEFN IPDLERLNSWARKDGINAVYFRAKQQMRPGILKNFHLMETGLKAAVDQTKLELANILIQLGIGNIVKDNGLEFFPAMVEI LNKSSSLPNLRFAFEFIDSFEVTYKGIIQYRVWKEIVDILPPNTMTFTKVSDNINNGDLSPNTIDFTKASDNMNLVVHDL QKLHQKAIEVCEEILDDIGIYFNNGRISMVEEFADYITRAEGVQGEWDIFLSNNRSKVWPELKEMEEQEQLRKYWLSLVQ EALAINEQIKLSF >Mature_732_residues PEINDIINNRKANATTAIKKKEDLEELERKIKELQRLRPEIIKAPGITSVVSERLEKVDLQGILDIITQERELWGRIEKR LNRDTINIAVVGLARQGKSTFLQQITLLTDAEIPASDGQPCTTTQSNIYHSPNESYGRVYFHSKSSFLEEVIIPYFKKLG FTSFPQRIEDFGRAQLPYLRENFSANDQSIYNHLKDEYYRHFSDYSHLLKNEKHVQKIRQDEIKEYVSQKYDLASQPTLF HHLAVEKVEIFCPFPNRGVEKIAVIDLPGLGDTRLGDAERMIKALAEDTDFILFIRKPNATGDFWGQRDVDLYDAAHQAL EDKLPLEQWSFMLLNYDGENGRACQDFQNTIKSKGIHVKEDLQSNCKNSTSAKEVLTKILTYLERNLVRLDKQYMSSTYQ QSFKRQQQVKLELQGLEQAIASYGDINAQYVVLRDKFVLQLYNDIEKFREEKREELDTSNPEFKAEVDAAINRCQQEFNI PDLERLNSWARKDGINAVYFRAKQQMRPGILKNFHLMETGLKAAVDQTKLELANILIQLGIGNIVKDNGLEFFPAMVEIL NKSSSLPNLRFAFEFIDSFEVTYKGIIQYRVWKEIVDILPPNTMTFTKVSDNINNGDLSPNTIDFTKASDNMNLVVHDLQ KLHQKAIEVCEEILDDIGIYFNNGRISMVEEFADYITRAEGVQGEWDIFLSNNRSKVWPELKEMEEQEQLRKYWLSLVQE ALAINEQIKLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84923; Mature: 84792
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEINDIINNRKANATTAIKKKEDLEELERKIKELQRLRPEIIKAPGITSVVSERLEKVD CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LQGILDIITQERELWGRIEKRLNRDTINIAVVGLARQGKSTFLQQITLLTDAEIPASDGQ HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCC PCTTTQSNIYHSPNESYGRVYFHSKSSFLEEVIIPYFKKLGFTSFPQRIEDFGRAQLPYL CCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHH RENFSANDQSIYNHLKDEYYRHFSDYSHLLKNEKHVQKIRQDEIKEYVSQKYDLASQPTL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH FHHLAVEKVEIFCPFPNRGVEKIAVIDLPGLGDTRLGDAERMIKALAEDTDFILFIRKPN HHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCC ATGDFWGQRDVDLYDAAHQALEDKLPLEQWSFMLLNYDGENGRACQDFQNTIKSKGIHVK CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCH EDLQSNCKNSTSAKEVLTKILTYLERNLVRLDKQYMSSTYQQSFKRQQQVKLELQGLEQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASYGDINAQYVVLRDKFVLQLYNDIEKFREEKREELDTSNPEFKAEVDAAINRCQQEFN HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC IPDLERLNSWARKDGINAVYFRAKQQMRPGILKNFHLMETGLKAAVDQTKLELANILIQL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGNIVKDNGLEFFPAMVEILNKSSSLPNLRFAFEFIDSFEVTYKGIIQYRVWKEIVDIL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPNTMTFTKVSDNINNGDLSPNTIDFTKASDNMNLVVHDLQKLHQKAIEVCEEILDDIGI CCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCE YFNNGRISMVEEFADYITRAEGVQGEWDIFLSNNRSKVWPELKEMEEQEQLRKYWLSLVQ EECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH EALAINEQIKLSF HHHHCCCCEEECC >Mature Secondary Structure PEINDIINNRKANATTAIKKKEDLEELERKIKELQRLRPEIIKAPGITSVVSERLEKVD CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LQGILDIITQERELWGRIEKRLNRDTINIAVVGLARQGKSTFLQQITLLTDAEIPASDGQ HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCC PCTTTQSNIYHSPNESYGRVYFHSKSSFLEEVIIPYFKKLGFTSFPQRIEDFGRAQLPYL CCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHH RENFSANDQSIYNHLKDEYYRHFSDYSHLLKNEKHVQKIRQDEIKEYVSQKYDLASQPTL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH FHHLAVEKVEIFCPFPNRGVEKIAVIDLPGLGDTRLGDAERMIKALAEDTDFILFIRKPN HHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCC ATGDFWGQRDVDLYDAAHQALEDKLPLEQWSFMLLNYDGENGRACQDFQNTIKSKGIHVK CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCH EDLQSNCKNSTSAKEVLTKILTYLERNLVRLDKQYMSSTYQQSFKRQQQVKLELQGLEQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASYGDINAQYVVLRDKFVLQLYNDIEKFREEKREELDTSNPEFKAEVDAAINRCQQEFN HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC IPDLERLNSWARKDGINAVYFRAKQQMRPGILKNFHLMETGLKAAVDQTKLELANILIQL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGNIVKDNGLEFFPAMVEILNKSSSLPNLRFAFEFIDSFEVTYKGIIQYRVWKEIVDIL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPNTMTFTKVSDNINNGDLSPNTIDFTKASDNMNLVVHDLQKLHQKAIEVCEEILDDIGI CCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCE YFNNGRISMVEEFADYITRAEGVQGEWDIFLSNNRSKVWPELKEMEEQEQLRKYWLSLVQ EECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH EALAINEQIKLSF HHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA