| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475494
Identifier: 113475494
GI number: 113475494
Start: 2786301
End: 2786687
Strand: Direct
Name: 113475494
Synonym: Tery_1825
Alternate gene names: NA
Gene position: 2786301-2786687 (Clockwise)
Preceding gene: 113475491
Following gene: 113475497
Centisome position: 35.95
GC content: 32.04
Gene sequence:
>387_bases ATGAAAGACGAAAACCAAGAAATTTTAGAAGTAAACCAAGCATTTTATCGAGCTTTTGAAAAACGGGACATTATAGCTTT GCATGGCATTTTGTCTCAGGGCATTAGTACAGTTTGTATCCATCCAGGCCGTGGTGCAATTTGTGGTTTTGAGAATATTC GTAATTCCTGGGATTTAATATTTAAAAATACGGATTATATTGAAATTGATACTGATGTTATTATAGCAGAAGTTAATGGA GATATTGGTTATGTTATTTTGGTAGAAAATATCATGCAAATTAGTAGAGATACGACAATAAAAGATAAGTCTATAGCAAC GAATATTTTTGAGAAGATGGGTGGAAATTGGTATTTGATTAATCATCATGCTAGTCCTGTGTTATAG
Upstream 100 bases:
>100_bases TGTTTCCATAGTCTATCAAAGAAATAATTTGGTTAAGTTTACCAAGTATTATCTTAACCCCAATCATAACAATTATTGTG GCTCTAAAGCAAAAAAAATT
Downstream 100 bases:
>100_bases TAATTAAACTCGAATTTAACGATAAAATTTTACAGTTTTTTTTCTTTAGTCTAAATTAAACTAATTTTGAAGTTGATGAT GTACAAAGTTTGATAATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKDENQEILEVNQAFYRAFEKRDIIALHGILSQGISTVCIHPGRGAICGFENIRNSWDLIFKNTDYIEIDTDVIIAEVNG DIGYVILVENIMQISRDTTIKDKSIATNIFEKMGGNWYLINHHASPVL
Sequences:
>Translated_128_residues MKDENQEILEVNQAFYRAFEKRDIIALHGILSQGISTVCIHPGRGAICGFENIRNSWDLIFKNTDYIEIDTDVIIAEVNG DIGYVILVENIMQISRDTTIKDKSIATNIFEKMGGNWYLINHHASPVL >Mature_128_residues MKDENQEILEVNQAFYRAFEKRDIIALHGILSQGISTVCIHPGRGAICGFENIRNSWDLIFKNTDYIEIDTDVIIAEVNG DIGYVILVENIMQISRDTTIKDKSIATNIFEKMGGNWYLINHHASPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14526; Mature: 14526
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDENQEILEVNQAFYRAFEKRDIIALHGILSQGISTVCIHPGRGAICGFENIRNSWDLI CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCEECHHHCCCCEEEE FKNTDYIEIDTDVIIAEVNGDIGYVILVENIMQISRDTTIKDKSIATNIFEKMGGNWYLI ECCCCEEEECCCEEEEEECCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE NHHASPVL ECCCCCCC >Mature Secondary Structure MKDENQEILEVNQAFYRAFEKRDIIALHGILSQGISTVCIHPGRGAICGFENIRNSWDLI CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCEECHHHCCCCEEEE FKNTDYIEIDTDVIIAEVNGDIGYVILVENIMQISRDTTIKDKSIATNIFEKMGGNWYLI ECCCCEEEECCCEEEEEECCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE NHHASPVL ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA