| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is katG [H]
Identifier: 113475432
GI number: 113475432
Start: 2679934
End: 2680065
Strand: Direct
Name: katG [H]
Synonym: Tery_1760
Alternate gene names: 113475432
Gene position: 2679934-2680065 (Clockwise)
Preceding gene: 113475431
Following gene: 113475433
Centisome position: 34.58
GC content: 36.36
Gene sequence:
>132_bases ATGGGTTGGAAAAATACCTTTGTTAGTGGTCATGGTGTTGCTACTATTACTAGTCTTCTAGAAGAGGCTTGGACTAATAC ACCAACACAATGGAGCAACAACTTCTTTAAAAATTTATTTGGCTATGAGTGA
Upstream 100 bases:
>100_bases AATTGCAGGGGGACATACTTTTGGAAAACCTCACGGTGCTCCTGATCCAGAGCAATATATTGACCGAGAGCCTGAAGGGG CAAAGATTGAATAACAAAGC
Downstream 100 bases:
>100_bases GAACTAACAAAAAACCCTGCCGGCGCCCATCAGTGAATTCAATTCCTAAAGGAGGAGCTGGCGCAGTTACTGTCCCTGAT ACAGGATTTCTCAAAAAGTC
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase [H]
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MGWKNTFVSGHGVATITSLLEEAWTNTPTQWSNNFFKNLFGYE
Sequences:
>Translated_43_residues MGWKNTFVSGHGVATITSLLEEAWTNTPTQWSNNFFKNLFGYE >Mature_42_residues GWKNTFVSGHGVATITSLLEEAWTNTPTQWSNNFFKNLFGYE
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=43, Percent_Identity=62.7906976744186, Blast_Score=59, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 4925; Mature: 4794
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWKNTFVSGHGVATITSLLEEAWTNTPTQWSNNFFKNLFGYE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure GWKNTFVSGHGVATITSLLEEAWTNTPTQWSNNFFKNLFGYE CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA