| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475429
Identifier: 113475429
GI number: 113475429
Start: 2676199
End: 2676519
Strand: Direct
Name: 113475429
Synonym: Tery_1757
Alternate gene names: NA
Gene position: 2676199-2676519 (Clockwise)
Preceding gene: 113475428
Following gene: 113475430
Centisome position: 34.53
GC content: 30.84
Gene sequence:
>321_bases ATGATTTCTAAAGATATTTTATTTGCTCTTTCTTTATTTCCATATTTAGGTTTTCTTTGGTTTTTAACTCGTTCTGGTAA AGCACCTCGTTTAGCTTTATTTGGATTTTATGGCACTTTAGTATTTGTGGGTGTTACTATTCCGGCTGGAATTTATGCTC AACAAGTTTATGGTGAAGCTTTAGCAAATATTGATTGGTTACATGGCGGTGCTGAAGTATTTTTAACTTTATCTAATATT TTAGTAGTGTTAGGTTTTAGGGAAGCTATTTTAAAAAAGGAAGAAGTAAGAAATAAGAAGGAAGAAGGAACAACTTATTA G
Upstream 100 bases:
>100_bases ATTAAAATTGGGCTGGGAGAGCAAATTTTTACGGTAAAATATTACAATCTCAACACTCATTATTATACTCTATATTGTAA TTTTTAAGGCTTCTAAAAGT
Downstream 100 bases:
>100_bases TAAATTTTCATAAAATAGGAAATAGGTATCGGGGCAATAGGAAAAATTAATTAATAATTTCTGGATAAGAATTAATCGTG TTTTTGATGTTTAGAGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MISKDILFALSLFPYLGFLWFLTRSGKAPRLALFGFYGTLVFVGVTIPAGIYAQQVYGEALANIDWLHGGAEVFLTLSNI LVVLGFREAILKKEEVRNKKEEGTTY
Sequences:
>Translated_106_residues MISKDILFALSLFPYLGFLWFLTRSGKAPRLALFGFYGTLVFVGVTIPAGIYAQQVYGEALANIDWLHGGAEVFLTLSNI LVVLGFREAILKKEEVRNKKEEGTTY >Mature_106_residues MISKDILFALSLFPYLGFLWFLTRSGKAPRLALFGFYGTLVFVGVTIPAGIYAQQVYGEALANIDWLHGGAEVFLTLSNI LVVLGFREAILKKEEVRNKKEEGTTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11835; Mature: 11835
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKDILFALSLFPYLGFLWFLTRSGKAPRLALFGFYGTLVFVGVTIPAGIYAQQVYGEA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LANIDWLHGGAEVFLTLSNILVVLGFREAILKKEEVRNKKEEGTTY HHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MISKDILFALSLFPYLGFLWFLTRSGKAPRLALFGFYGTLVFVGVTIPAGIYAQQVYGEA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LANIDWLHGGAEVFLTLSNILVVLGFREAILKKEEVRNKKEEGTTY HHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA