| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475426
Identifier: 113475426
GI number: 113475426
Start: 2672948
End: 2674414
Strand: Direct
Name: 113475426
Synonym: Tery_1754
Alternate gene names: NA
Gene position: 2672948-2674414 (Clockwise)
Preceding gene: 113475425
Following gene: 113475428
Centisome position: 34.49
GC content: 31.15
Gene sequence:
>1467_bases ATGAAACTTGATAAATTACAAATTCAAAAACTGGAACAGTTTCTCGAAAAAATCAAAAATGACACCTATCCCGAACCTTC AACCCTACTTCATAGCCAAATAACTCAACAAATGTTTGATGTATGTTTGAAACAAATATCTTTACCTCCTGCGGCAAAAA TCTTAGATATTGGTTGCGGTCAAGGTGTGGCTTTGGAGATATTTAAAAAACATGGCTTTGCACCAATTGGAATTACTTTA AATAACGAAGATGTAGCTATTTGCCAACAAAAAGGTTATGAAGTTTATCAAATGGATCAATCATTTCTAGATTTTGCAGA TGACTATTTTGATTTTGTTTGGTGCCGACATTGTTTAGAACATAGCATTTTCCCATATTTTACTTTACAGGAAATTTATA GAGTTATTAAAAATGAAGGTTATTTATATATAGAAGTACCTGCTCCCGATACCAGTTGCCGACATCAAACGAATAAAAAT TACTATAGTGTATTGGGTAAAAGTATGTGGCTAGATTTAATTAAAAGAAGTGGATTTGAGATTTTACAAGTATTAGATAT TCAATTTAATGTGCCTGCTGGTCCTGATATTTATTGGGGAATGATTCAGAAGAAAATTCGTTCTACTATAACTTCAAAAA ATTCTGTCAAAATTATCAATTTTAAATGGGTATCTAACTCTGATAATCAAGAAATTAACCTTTCTCTAGACTCTAATGAA TTTACTCAAAAAATGATGCTTAACTATTTTGAAAAGGGGCAAGTTTATGAGTCGGAAATTTTTCAATTAATTTCCAGATT TCTCGAAGTCAATGATTGTTTTATTGATATTGGTGCTCATATTGGGTATTATTCGGTTTTGGCTGCCAAAATAGTGGGAA GTAAAGGGAAAGTATTTGCTTTTGAGCCAGAATTATCAAATCATCAAAAAACTTTAGAAAATATCACTCTTAATCATCTG AATAATATCAAACTATTTAATCTGGCTGTGGGTTCGGAAACTAAGCAAACACAAATATTTGTTAATCAAGATAATGATGG GGGTCATGCTTTGTGGGATGTAGGTAAACATCCATTCAATAAAAAAAGTTTGAATAATCAAACAATGCAAAATACTCAAC TATCTACACTAGATAATATTCTCAGCCAAGCTGGAAATATTACTAATTTAAAAATCATAAAAATTGATACTGAAGGAGGA GAACTTGATGTGGTTAAAGGAGCTGTAAATACAATTCGCAAATATGATGTTCCATACATTATTTGTGAGATTAATAGATT TGGTTTACAGCAAATGGGAACTAATGAAACTGAACTCCGGGAATTTATGAATTCTTTGGGCTATGAAACTTATTTGCTCA CCTCAAACAGCAGTAACCAGTTAGTTAGGTTACCTATGGGCAAGTATTATGAAACATCCTATGTTTTTAATGTTCTATTT ACAAGACAAAGTTTTATACCCCAATAG
Upstream 100 bases:
>100_bases AAAGATAATTATTCAGTAAAAAAAAAATTATTTAATGATAAAATATTTACAAGTTAAAAATTTACTATTAACATAATTTA ACTGCTTAAAAATATAAACT
Downstream 100 bases:
>100_bases TTTTCAATAATAGGTAAATTAAGCAGTGACATAAAATTAATTAAATCTATCAAGGTTTGGGGAAAAAATAAACTTCAGTA TTTCAACCCTAATACTGAGC
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Methyltransferase; Methyltransferase FkbM; Methyltransferase Type; SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Lipopolysaccharide Biosynthesis Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCGQGVALEIFKKHGFAPIGITL NNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLEHSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKN YYSVLGKSMWLDLIKRSGFEILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFAFEPELSNHQKTLENITLNHL NNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFNKKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGG ELDVVKGAVNTIRKYDVPYIICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF TRQSFIPQ
Sequences:
>Translated_488_residues MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCGQGVALEIFKKHGFAPIGITL NNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLEHSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKN YYSVLGKSMWLDLIKRSGFEILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFAFEPELSNHQKTLENITLNHL NNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFNKKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGG ELDVVKGAVNTIRKYDVPYIICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF TRQSFIPQ >Mature_488_residues MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCGQGVALEIFKKHGFAPIGITL NNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLEHSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKN YYSVLGKSMWLDLIKRSGFEILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFAFEPELSNHQKTLENITLNHL NNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFNKKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGG ELDVVKGAVNTIRKYDVPYIICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF TRQSFIPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56085; Mature: 56085
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCC QGVALEIFKKHGFAPIGITLNNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLE CCHHHHHHHHCCCEEEEEEECCCCEEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH HSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKNYYSVLGKSMWLDLIKRSGFE CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH ILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCHH FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHCCCCCEEE FEPELSNHQKTLENITLNHLNNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFN ECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCC KKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGGELDVVKGAVNTIRKYDVPYI CCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHCCCCEE ICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF EEECCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHH TRQSFIPQ HHHHCCCC >Mature Secondary Structure MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCC QGVALEIFKKHGFAPIGITLNNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLE CCHHHHHHHHCCCEEEEEEECCCCEEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH HSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKNYYSVLGKSMWLDLIKRSGFE CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH ILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCHH FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHCCCCCEEE FEPELSNHQKTLENITLNHLNNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFN ECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCC KKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGGELDVVKGAVNTIRKYDVPYI CCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHCCCCEE ICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF EEECCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHH TRQSFIPQ HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA