| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475413
Identifier: 113475413
GI number: 113475413
Start: 2650665
End: 2652191
Strand: Direct
Name: 113475413
Synonym: Tery_1741
Alternate gene names: NA
Gene position: 2650665-2652191 (Clockwise)
Preceding gene: 113475412
Following gene: 113475414
Centisome position: 34.2
GC content: 39.29
Gene sequence:
>1527_bases ATGCAAACAAAGTTTACCTCTTTGAAAAAAATTAAATCTAGAAAATATTTTCATATAAATAGTTTGGGAGCTATTTTATT TAGTCTGGCAGTAAATTTATCCCCGTGGTTTTCAGCAAAAGTACAAGCACAAACAGACATTTATTGTAAGTTACCGCCAG AAGCGATCGCCTCTAAAGAAAATCTTCGCCAAGCAGTTTTAGAAGGAAATAAAAATGCAGAAAAACAATATCAAGATATC CTAATTAAGCATAATAGAGAAGTTGGCAATTGTCGCATGAGAAATTGGCCGAGAACTCAAGGTATTTGGTTGCGACTATA TCCTTGTGATGCTAGACCAGGAGAAATTGACAGGATACTAGATAAAATTGTTAATCAAGGTTATAACCAAGTATATATAG AAGCTTTCTATGACGGGCAAGTGCTTCTACCCGCAGCAAATAACCCTACAGTTTGGCCTTCTATACTCCGTGTACCTGGT TATGAAAATGTCGATCTATTAGCTGATAGTCTGAAAAAAGCAAAGGAAAGAGGTTTGCGTGCTTATGCTTGGGTATTTAC CATGAATTTTGGGTACACTTATTCTCAACTGCCTAACCGTCAACAAGCTTTAGCGCGTAATGGTAGAGGTCAAACAACCC TGGATGTGATTCCAGATAATGTTAGTTTACAGAACCAGTTAGGTGCGAGTCATGCTTTCCATACTTTTATAGATCCTTAC AGTCCCCAAGCACGGCAAGATTATAATGTTATGGTGAATGAGGTTTTAAAACGACAACCTCAAGGAGTTTTATTCGACTA TATTCGTTATTTGCGGGGAATGGGGAGTGACTCTGTAGCCGACCAGGTAAAAGATTTATGGATATATAGTGAGGCTTCTC AGAATGTGTTATTGCAACGGGCTAAAAATGAAGCGGGAAAGGAATTAATTAGAAAATTTGTAGACAAGGGGTATGTTACT TCTCAAGAAATTAATGGGAGAACTCCCAAATGGCAACGTTTCTTTTCACCCTCTATTAATAGCAGACTAACGGAGCGAGG TTTGGAAACACAAATTTGGGAATTGAGTGTTGCTCATGCTGCTCAAGGAATACTAGATTTTCTCCAGGTAGCTAGTCAAC CAGTGCAAGAAAAAGGTCTGCCTGCTGGTGCTGTATTTTTCCCTGGTGGGAATAGAAGAATACAGAGTAATGGTTTTGAC TCTCGCCTCCAACCTTGGGATCAATTTCCGACTTCGATGGAATGGCATCCAATGGCGTATGCAACTTGTGGCGATCTCGA TCCCAGTTGTATTGTTTCTAAAGTGGAGAGAGTTATGAGTATGACTCCTAAGGGGGTGAAAGTTATTCCGGCGATCGCTG GGGCTTGGGGAGAACCTTTGAAAAATCGTCCTTCTTTGGAAATACAAATGCAAGCTATTAAAGTCGCAACTCCTCAGATT AATTCTATTAGTCATTTTTCTTATGGTTGGCAAAATATTGAAGAAACCAGGGAACGTAAACATTGTCGGTTGTCAACTGG GAATTAA
Upstream 100 bases:
>100_bases TTAAGACCAAAAAACTTTCAGGAGCTCAGTAATTTTAGGCAATTATTTGACATCTGAGGTTTAAGACTATTTGTAAAATT ATTTTTTCACCCTTAGTATT
Downstream 100 bases:
>100_bases ATAAATATCTGGGGATTAAATAAATATCTGGAGATTAAATAAATATCTGGAGATTAAATAAATATCTGGAGATTAAATAA ATATCTGGAGATTAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKENLRQAVLEGNKNAEKQYQDI LIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRILDKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPG YENVDLLADSLKKAKERGLRAYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQRAKNEAGKELIRKFVDKGYVT SQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHAAQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFD SRLQPWDQFPTSMEWHPMAYATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI NSISHFSYGWQNIEETRERKHCRLSTGN
Sequences:
>Translated_508_residues MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKENLRQAVLEGNKNAEKQYQDI LIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRILDKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPG YENVDLLADSLKKAKERGLRAYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQRAKNEAGKELIRKFVDKGYVT SQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHAAQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFD SRLQPWDQFPTSMEWHPMAYATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI NSISHFSYGWQNIEETRERKHCRLSTGN >Mature_508_residues MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKENLRQAVLEGNKNAEKQYQDI LIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRILDKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPG YENVDLLADSLKKAKERGLRAYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQRAKNEAGKELIRKFVDKGYVT SQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHAAQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFD SRLQPWDQFPTSMEWHPMAYATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI NSISHFSYGWQNIEETRERKHCRLSTGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57732; Mature: 57732
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKE CCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCHHHHHCHH NLRQAVLEGNKNAEKQYQDILIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRIL HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH DKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPGYENVDLLADSLKKAKERGLR HHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCE AYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY EEEEEEEEECCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHCCHHHHHHHCCCC SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQR CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEECCCHHHHHHHH AKNEAGKELIRKFVDKGYVTSQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHA HHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH AQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFDSRLQPWDQFPTSMEWHPMAY HHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEE ATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI EECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC NSISHFSYGWQNIEETRERKHCRLSTGN CCCCHHHCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKE CCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCHHHHHCHH NLRQAVLEGNKNAEKQYQDILIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRIL HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH DKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPGYENVDLLADSLKKAKERGLR HHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCE AYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY EEEEEEEEECCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHCCHHHHHHHCCCC SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQR CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEECCCHHHHHHHH AKNEAGKELIRKFVDKGYVTSQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHA HHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH AQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFDSRLQPWDQFPTSMEWHPMAY HHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEE ATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI EECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC NSISHFSYGWQNIEETRERKHCRLSTGN CCCCHHHCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA