Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475413

Identifier: 113475413

GI number: 113475413

Start: 2650665

End: 2652191

Strand: Direct

Name: 113475413

Synonym: Tery_1741

Alternate gene names: NA

Gene position: 2650665-2652191 (Clockwise)

Preceding gene: 113475412

Following gene: 113475414

Centisome position: 34.2

GC content: 39.29

Gene sequence:

>1527_bases
ATGCAAACAAAGTTTACCTCTTTGAAAAAAATTAAATCTAGAAAATATTTTCATATAAATAGTTTGGGAGCTATTTTATT
TAGTCTGGCAGTAAATTTATCCCCGTGGTTTTCAGCAAAAGTACAAGCACAAACAGACATTTATTGTAAGTTACCGCCAG
AAGCGATCGCCTCTAAAGAAAATCTTCGCCAAGCAGTTTTAGAAGGAAATAAAAATGCAGAAAAACAATATCAAGATATC
CTAATTAAGCATAATAGAGAAGTTGGCAATTGTCGCATGAGAAATTGGCCGAGAACTCAAGGTATTTGGTTGCGACTATA
TCCTTGTGATGCTAGACCAGGAGAAATTGACAGGATACTAGATAAAATTGTTAATCAAGGTTATAACCAAGTATATATAG
AAGCTTTCTATGACGGGCAAGTGCTTCTACCCGCAGCAAATAACCCTACAGTTTGGCCTTCTATACTCCGTGTACCTGGT
TATGAAAATGTCGATCTATTAGCTGATAGTCTGAAAAAAGCAAAGGAAAGAGGTTTGCGTGCTTATGCTTGGGTATTTAC
CATGAATTTTGGGTACACTTATTCTCAACTGCCTAACCGTCAACAAGCTTTAGCGCGTAATGGTAGAGGTCAAACAACCC
TGGATGTGATTCCAGATAATGTTAGTTTACAGAACCAGTTAGGTGCGAGTCATGCTTTCCATACTTTTATAGATCCTTAC
AGTCCCCAAGCACGGCAAGATTATAATGTTATGGTGAATGAGGTTTTAAAACGACAACCTCAAGGAGTTTTATTCGACTA
TATTCGTTATTTGCGGGGAATGGGGAGTGACTCTGTAGCCGACCAGGTAAAAGATTTATGGATATATAGTGAGGCTTCTC
AGAATGTGTTATTGCAACGGGCTAAAAATGAAGCGGGAAAGGAATTAATTAGAAAATTTGTAGACAAGGGGTATGTTACT
TCTCAAGAAATTAATGGGAGAACTCCCAAATGGCAACGTTTCTTTTCACCCTCTATTAATAGCAGACTAACGGAGCGAGG
TTTGGAAACACAAATTTGGGAATTGAGTGTTGCTCATGCTGCTCAAGGAATACTAGATTTTCTCCAGGTAGCTAGTCAAC
CAGTGCAAGAAAAAGGTCTGCCTGCTGGTGCTGTATTTTTCCCTGGTGGGAATAGAAGAATACAGAGTAATGGTTTTGAC
TCTCGCCTCCAACCTTGGGATCAATTTCCGACTTCGATGGAATGGCATCCAATGGCGTATGCAACTTGTGGCGATCTCGA
TCCCAGTTGTATTGTTTCTAAAGTGGAGAGAGTTATGAGTATGACTCCTAAGGGGGTGAAAGTTATTCCGGCGATCGCTG
GGGCTTGGGGAGAACCTTTGAAAAATCGTCCTTCTTTGGAAATACAAATGCAAGCTATTAAAGTCGCAACTCCTCAGATT
AATTCTATTAGTCATTTTTCTTATGGTTGGCAAAATATTGAAGAAACCAGGGAACGTAAACATTGTCGGTTGTCAACTGG
GAATTAA

Upstream 100 bases:

>100_bases
TTAAGACCAAAAAACTTTCAGGAGCTCAGTAATTTTAGGCAATTATTTGACATCTGAGGTTTAAGACTATTTGTAAAATT
ATTTTTTCACCCTTAGTATT

Downstream 100 bases:

>100_bases
ATAAATATCTGGGGATTAAATAAATATCTGGAGATTAAATAAATATCTGGAGATTAAATAAATATCTGGAGATTAAATAA
ATATCTGGAGATTAAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKENLRQAVLEGNKNAEKQYQDI
LIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRILDKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPG
YENVDLLADSLKKAKERGLRAYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY
SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQRAKNEAGKELIRKFVDKGYVT
SQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHAAQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFD
SRLQPWDQFPTSMEWHPMAYATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI
NSISHFSYGWQNIEETRERKHCRLSTGN

Sequences:

>Translated_508_residues
MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKENLRQAVLEGNKNAEKQYQDI
LIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRILDKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPG
YENVDLLADSLKKAKERGLRAYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY
SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQRAKNEAGKELIRKFVDKGYVT
SQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHAAQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFD
SRLQPWDQFPTSMEWHPMAYATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI
NSISHFSYGWQNIEETRERKHCRLSTGN
>Mature_508_residues
MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKENLRQAVLEGNKNAEKQYQDI
LIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRILDKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPG
YENVDLLADSLKKAKERGLRAYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY
SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQRAKNEAGKELIRKFVDKGYVT
SQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHAAQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFD
SRLQPWDQFPTSMEWHPMAYATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI
NSISHFSYGWQNIEETRERKHCRLSTGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57732; Mature: 57732

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKE
CCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCHHHHHCHH
NLRQAVLEGNKNAEKQYQDILIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRIL
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
DKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPGYENVDLLADSLKKAKERGLR
HHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCE
AYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY
EEEEEEEEECCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHCCHHHHHHHCCCC
SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEECCCHHHHHHHH
AKNEAGKELIRKFVDKGYVTSQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHA
HHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
AQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFDSRLQPWDQFPTSMEWHPMAY
HHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEE
ATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI
EECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC
NSISHFSYGWQNIEETRERKHCRLSTGN
CCCCHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQTKFTSLKKIKSRKYFHINSLGAILFSLAVNLSPWFSAKVQAQTDIYCKLPPEAIASKE
CCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCHHHHHCHH
NLRQAVLEGNKNAEKQYQDILIKHNREVGNCRMRNWPRTQGIWLRLYPCDARPGEIDRIL
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
DKIVNQGYNQVYIEAFYDGQVLLPAANNPTVWPSILRVPGYENVDLLADSLKKAKERGLR
HHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCE
AYAWVFTMNFGYTYSQLPNRQQALARNGRGQTTLDVIPDNVSLQNQLGASHAFHTFIDPY
EEEEEEEEECCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHCCHHHHHHHCCCC
SPQARQDYNVMVNEVLKRQPQGVLFDYIRYLRGMGSDSVADQVKDLWIYSEASQNVLLQR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEECCCHHHHHHHH
AKNEAGKELIRKFVDKGYVTSQEINGRTPKWQRFFSPSINSRLTERGLETQIWELSVAHA
HHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
AQGILDFLQVASQPVQEKGLPAGAVFFPGGNRRIQSNGFDSRLQPWDQFPTSMEWHPMAY
HHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEE
ATCGDLDPSCIVSKVERVMSMTPKGVKVIPAIAGAWGEPLKNRPSLEIQMQAIKVATPQI
EECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC
NSISHFSYGWQNIEETRERKHCRLSTGN
CCCCHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA