Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475393

Identifier: 113475393

GI number: 113475393

Start: 2610290

End: 2611039

Strand: Reverse

Name: 113475393

Synonym: Tery_1717

Alternate gene names: NA

Gene position: 2611039-2610290 (Counterclockwise)

Preceding gene: 113475394

Following gene: 113475392

Centisome position: 33.69

GC content: 38.8

Gene sequence:

>750_bases
ATGCTAAATATTAAACGGGCCTTAAAACAGGATAGGTTGCTCAGAGCATTAACAGGATTAAATAGTAAAGCATTTCAATC
CTTACTCTTAACCTTTACTCAGGTATATGAGCAAACATTGAGGGATAAACCTCGTCAACGCTCTGTTGGAGGAGGTCGTA
AGGCTCGTTTACGGACTTTTGAGCAAAAATTGTTTTATATTCTGTTCTATTTTAAATGCTACCCTACCTTTGATTTAGCT
GGTATCTTGTTCGATATAGACCGTAGCCAGGCACATCACTGGGCTCATCGTTTACAGCCTATATTAGAAGCAGCCTTGGG
AGAAAAAAAGGCACTACCAGAACGCCAAATCAATAGTGTCCAAGCATTTATAGAGCGTTTCCCTGGAGTAGAACGAGTGG
TAATGGATGGCACAGAACGGCCAGTAAAACGGCCTACTGACTCAGAAACACAAAAACTGAATTATTCAGGAAAAAAAAAG
TGTCATACCCGTAAACATCTAGCAGCAGTAAACCAAAACAAACAAGTGCTGGTATTAAGCCAAGATAGAGTTGGAAAGTT
ACATGACAAGAAATTCCTAGACGAAGAAAAGTTGATAGGAAATATACCTGTGGAAATACCAATTGAAGTAGATACTGGCT
TTCAAGGTATTCAACACCAGTATGAAAATATCCGCATACCCCATAAAAAACCAAAGGGAGGAGAATTAACTCAACAGCAA
AAGATCGAAAATAGGACATTGAGTCAATAA

Upstream 100 bases:

>100_bases
ATCCAAATATTGCTGTTAGTCTCAACAACCTGACAAATTTATATTAGAGTTGTTGGGAAATAAGTTAAAATAAGTTAAGT
TAAGAAGAAATTGACGAAGA

Downstream 100 bases:

>100_bases
GCGGGTGATATGTGAAAATGCCTTCGCGGGTGTCAAGCGCTATGGGGCTGTCAATCAGATTTACCGTAATCATAAGCATG
ATTTTGATGACAAATTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLNIKRALKQDRLLRALTGLNSKAFQSLLLTFTQVYEQTLRDKPRQRSVGGGRKARLRTFEQKLFYILFYFKCYPTFDLA
GILFDIDRSQAHHWAHRLQPILEAALGEKKALPERQINSVQAFIERFPGVERVVMDGTERPVKRPTDSETQKLNYSGKKK
CHTRKHLAAVNQNKQVLVLSQDRVGKLHDKKFLDEEKLIGNIPVEIPIEVDTGFQGIQHQYENIRIPHKKPKGGELTQQQ
KIENRTLSQ

Sequences:

>Translated_249_residues
MLNIKRALKQDRLLRALTGLNSKAFQSLLLTFTQVYEQTLRDKPRQRSVGGGRKARLRTFEQKLFYILFYFKCYPTFDLA
GILFDIDRSQAHHWAHRLQPILEAALGEKKALPERQINSVQAFIERFPGVERVVMDGTERPVKRPTDSETQKLNYSGKKK
CHTRKHLAAVNQNKQVLVLSQDRVGKLHDKKFLDEEKLIGNIPVEIPIEVDTGFQGIQHQYENIRIPHKKPKGGELTQQQ
KIENRTLSQ
>Mature_249_residues
MLNIKRALKQDRLLRALTGLNSKAFQSLLLTFTQVYEQTLRDKPRQRSVGGGRKARLRTFEQKLFYILFYFKCYPTFDLA
GILFDIDRSQAHHWAHRLQPILEAALGEKKALPERQINSVQAFIERFPGVERVVMDGTERPVKRPTDSETQKLNYSGKKK
CHTRKHLAAVNQNKQVLVLSQDRVGKLHDKKFLDEEKLIGNIPVEIPIEVDTGFQGIQHQYENIRIPHKKPKGGELTQQQ
KIENRTLSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28866; Mature: 28866

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIKRALKQDRLLRALTGLNSKAFQSLLLTFTQVYEQTLRDKPRQRSVGGGRKARLRTF
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHH
EQKLFYILFYFKCYPTFDLAGILFDIDRSQAHHWAHRLQPILEAALGEKKALPERQINSV
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHH
QAFIERFPGVERVVMDGTERPVKRPTDSETQKLNYSGKKKCHTRKHLAAVNQNKQVLVLS
HHHHHHCCCHHEEHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEC
QDRVGKLHDKKFLDEEKLIGNIPVEIPIEVDTGFQGIQHQYENIRIPHKKPKGGELTQQQ
CCCCCHHHHHHHCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
KIENRTLSQ
HHHHHCCCC
>Mature Secondary Structure
MLNIKRALKQDRLLRALTGLNSKAFQSLLLTFTQVYEQTLRDKPRQRSVGGGRKARLRTF
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHH
EQKLFYILFYFKCYPTFDLAGILFDIDRSQAHHWAHRLQPILEAALGEKKALPERQINSV
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHH
QAFIERFPGVERVVMDGTERPVKRPTDSETQKLNYSGKKKCHTRKHLAAVNQNKQVLVLS
HHHHHHCCCHHEEHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEC
QDRVGKLHDKKFLDEEKLIGNIPVEIPIEVDTGFQGIQHQYENIRIPHKKPKGGELTQQQ
CCCCCHHHHHHHCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
KIENRTLSQ
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA