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The map label for this gene is gcp

Identifier: 113475323

GI number: 113475323

Start: 2495998

End: 2496975

Strand: Direct

Name: gcp

Synonym: Tery_1635

Alternate gene names: 113475323

Gene position: 2495998-2496975 (Clockwise)

Preceding gene: 113475318

Following gene: 113475324

Centisome position: 32.21

GC content: 40.18

Gene sequence:

>978_bases
ATGACAACGGTTTTAGCTATAGAAACAAGTTGTGATGAAACATCTGTGGCAATTGTTAAAAATCGTCAAGTTTTAAGTAA
CATTGTGAAGTCACAAATTAATATCCATAGCTTTTATGGAGGAGTAGTTCCAGAGGTAGCTTCACGACAACATTTAGAAA
TAATTAATCAGGCGATCGCTCAAGCTTTCAGAGAAGCAAATTTAGACTGGCCAGACATTGATGGTATTGGAGCTACTTGC
GCCCCTGGTCTAGTTGGCGCTCTGTTAGTTGGCCTGACGGCGGCCAAAACCTTAGCTATTGTCCATGAAAAGCCCTTTGT
GGGAGTCCATCACTTAGAAGGTCATATTTATGCAACCTACCTAAGCCAACCCGAGTTAGTACCACCTTTTCTTTGTTTGT
TAGTTTCTGGAGGTCATACCAGTTTGATTTATGTCAAAAATTGTGGGGAATATGAAACTTTAGGGCAAACAAGAGATGAT
GCAGCAGGAGAAGCTTTTGACAAAGTAGCTAGATTATTAAAACTTGGCTATCCCGGTGGACCTGTAATTGATAAATTAGC
TGCAGAGGGTAATAAATTAGCATTTTCTCTCCCTGAAGGGAAAATTTCTTTGCCTGGAGGAGGCTATCATCCTTATGATT
TTAGTTTCAGTGGACTCAAAACTGCAGTATTGCGATTAGTCCAGAAAATAGAACAAGAAGGTAATGAATTATTATCAGGG
TCTTCAGTAACTAAAGACATTGCAGCCAGCTTTCAAGAAACTGTAGCAAAAGGGCTAACAAAAAGAGCTATCGCTTGTGC
ATTAGACTATAGCTTAAACACAATTGCTATTGGCGGTGGTGTAGCAGCTAATAGTAGTTTGCGACAGCACTTAAGTAGAG
CAGTAGAAAGTCATAACTTGCAAGTACTATTTCCCTCACTCAGATTTTGTACGGATAATGCAGCCATGATAGGTTGTGTG
CGGCTCGTTGGCCACTAA

Upstream 100 bases:

>100_bases
TTATTTATTGTCTGTTTGATTTTATAATACTTTATTGATATCAACACTAAATTTTTTTAGTGTTAGTTGTTTGAAAAAAT
TAATATCAATTTATGTAGCA

Downstream 100 bases:

>100_bases
GACCAGATATTTAGGTAGAAATGGCCGTCCTAAATCAACAGATGAAGACAACCTCAGATTTATGGATAACTCTTATGACC
TTGTAGGTGAAATTCCTACC

Product: putative DNA-binding/iron metalloprotein/AP endonuclease

Products: NA

Alternate protein names: Glycoprotease

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTTVLAIETSCDETSVAIVKNRQVLSNIVKSQINIHSFYGGVVPEVASRQHLEIINQAIAQAFREANLDWPDIDGIGATC
APGLVGALLVGLTAAKTLAIVHEKPFVGVHHLEGHIYATYLSQPELVPPFLCLLVSGGHTSLIYVKNCGEYETLGQTRDD
AAGEAFDKVARLLKLGYPGGPVIDKLAAEGNKLAFSLPEGKISLPGGGYHPYDFSFSGLKTAVLRLVQKIEQEGNELLSG
SSVTKDIAASFQETVAKGLTKRAIACALDYSLNTIAIGGGVAANSSLRQHLSRAVESHNLQVLFPSLRFCTDNAAMIGCV
RLVGH

Sequences:

>Translated_325_residues
MTTVLAIETSCDETSVAIVKNRQVLSNIVKSQINIHSFYGGVVPEVASRQHLEIINQAIAQAFREANLDWPDIDGIGATC
APGLVGALLVGLTAAKTLAIVHEKPFVGVHHLEGHIYATYLSQPELVPPFLCLLVSGGHTSLIYVKNCGEYETLGQTRDD
AAGEAFDKVARLLKLGYPGGPVIDKLAAEGNKLAFSLPEGKISLPGGGYHPYDFSFSGLKTAVLRLVQKIEQEGNELLSG
SSVTKDIAASFQETVAKGLTKRAIACALDYSLNTIAIGGGVAANSSLRQHLSRAVESHNLQVLFPSLRFCTDNAAMIGCV
RLVGH
>Mature_324_residues
TTVLAIETSCDETSVAIVKNRQVLSNIVKSQINIHSFYGGVVPEVASRQHLEIINQAIAQAFREANLDWPDIDGIGATCA
PGLVGALLVGLTAAKTLAIVHEKPFVGVHHLEGHIYATYLSQPELVPPFLCLLVSGGHTSLIYVKNCGEYETLGQTRDDA
AGEAFDKVARLLKLGYPGGPVIDKLAAEGNKLAFSLPEGKISLPGGGYHPYDFSFSGLKTAVLRLVQKIEQEGNELLSGS
SVTKDIAASFQETVAKGLTKRAIACALDYSLNTIAIGGGVAANSSLRQHLSRAVESHNLQVLFPSLRFCTDNAAMIGCVR
LVGH

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family

Homologues:

Organism=Homo sapiens, GI116812636, Length=335, Percent_Identity=34.3283582089552, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI8923380, Length=324, Percent_Identity=31.4814814814815, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1789445, Length=328, Percent_Identity=44.8170731707317, Blast_Score=249, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17557464, Length=332, Percent_Identity=31.0240963855422, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71995670, Length=329, Percent_Identity=32.8267477203647, Blast_Score=124, Evalue=9e-29,
Organism=Saccharomyces cerevisiae, GI6320099, Length=342, Percent_Identity=30.7017543859649, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6322891, Length=311, Percent_Identity=29.5819935691318, Blast_Score=90, Evalue=6e-19,
Organism=Drosophila melanogaster, GI20129063, Length=338, Percent_Identity=34.9112426035503, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI21357207, Length=330, Percent_Identity=30.6060606060606, Blast_Score=118, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GCP_TRIEI (Q115B3)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721384.1
- ProteinModelPortal:   Q115B3
- SMR:   Q115B3
- STRING:   Q115B3
- MEROPS:   M22.001
- GeneID:   4242324
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_1635
- NMPDR:   fig|203124.1.peg.324
- eggNOG:   COG0533
- HOGENOM:   HBG304663
- OMA:   PAVGVHH
- PhylomeDB:   Q115B3
- ProtClustDB:   PRK09604
- BioCyc:   TERY203124:TERY_1635-MONOMER
- GO:   GO:0006508
- HAMAP:   MF_01445
- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017861
- PANTHER:   PTHR11735
- PRINTS:   PR00789
- TIGRFAMs:   TIGR03723
- TIGRFAMs:   TIGR00329

Pfam domain/function: PF00814 Peptidase_M22

EC number: =3.4.24.57

Molecular weight: Translated: 34560; Mature: 34429

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS01016 GLYCOPROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVLAIETSCDETSVAIVKNRQVLSNIVKSQINIHSFYGGVVPEVASRQHLEIINQAIA
CCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
QAFREANLDWPDIDGIGATCAPGLVGALLVGLTAAKTLAIVHEKPFVGVHHLEGHIYATY
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCEEEEEE
LSQPELVPPFLCLLVSGGHTSLIYVKNCGEYETLGQTRDDAAGEAFDKVARLLKLGYPGG
CCCCCCCCHHHHHEECCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
PVIDKLAAEGNKLAFSLPEGKISLPGGGYHPYDFSFSGLKTAVLRLVQKIEQEGNELLSG
HHHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SSVTKDIAASFQETVAKGLTKRAIACALDYSLNTIAIGGGVAANSSLRQHLSRAVESHNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCE
QVLFPSLRFCTDNAAMIGCVRLVGH
EEEECCHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TTVLAIETSCDETSVAIVKNRQVLSNIVKSQINIHSFYGGVVPEVASRQHLEIINQAIA
CEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
QAFREANLDWPDIDGIGATCAPGLVGALLVGLTAAKTLAIVHEKPFVGVHHLEGHIYATY
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCEEEEEE
LSQPELVPPFLCLLVSGGHTSLIYVKNCGEYETLGQTRDDAAGEAFDKVARLLKLGYPGG
CCCCCCCCHHHHHEECCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
PVIDKLAAEGNKLAFSLPEGKISLPGGGYHPYDFSFSGLKTAVLRLVQKIEQEGNELLSG
HHHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SSVTKDIAASFQETVAKGLTKRAIACALDYSLNTIAIGGGVAANSSLRQHLSRAVESHNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCE
QVLFPSLRFCTDNAAMIGCVRLVGH
EEEECCHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA