| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475308
Identifier: 113475308
GI number: 113475308
Start: 2472377
End: 2472628
Strand: Direct
Name: 113475308
Synonym: Tery_1617
Alternate gene names: NA
Gene position: 2472377-2472628 (Clockwise)
Preceding gene: 113475307
Following gene: 113475309
Centisome position: 31.9
GC content: 34.52
Gene sequence:
>252_bases ATGAAGTATATTTTAATTGTTATGAGTTTGTCTGTGCTCATACCCATTTATGAAGCCTGGCAGGATGACGATATTTGGCA GAAAATGCTGGCTTTTAGTAGTATTGCTACTAAAACCTCTATTATGATATTAGTTGTGTCGGTTTTACGCAATGATTGGT CTATTGGGGTAGTTGCAGTAATTATTTTGGCTGTAGGTAATGCGGCATTAATGCTACTAGCACATTTAATTAAAAGTTTA AACAAGGTATGA
Upstream 100 bases:
>100_bases TAGATATATTTTTGATTACCTTTACTCCCAAAACTATTGTCTTTAAATATAACGAAGGGGGGTGGTATGAAGTACACCGA GTGAAACCGAAGAGAAAAAA
Downstream 100 bases:
>100_bases TTGACATTTTAAGTTATGGTTTAATAGTTGTGGGAGTGTTCTTCTGGTTTTGGGGAACATTTCCTCTAGTTGGTCACAGA TCGGTTTTATATAAGCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAVIILAVGNAALMLLAHLIKSL NKV
Sequences:
>Translated_83_residues MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAVIILAVGNAALMLLAHLIKSL NKV >Mature_83_residues MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAVIILAVGNAALMLLAHLIKSL NKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9214; Mature: 9214
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IILAVGNAALMLLAHLIKSLNKV HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IILAVGNAALMLLAHLIKSLNKV HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA