| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475288
Identifier: 113475288
GI number: 113475288
Start: 2442907
End: 2445636
Strand: Direct
Name: 113475288
Synonym: Tery_1597
Alternate gene names: NA
Gene position: 2442907-2445636 (Clockwise)
Preceding gene: 113475287
Following gene: 113475290
Centisome position: 31.52
GC content: 32.86
Gene sequence:
>2730_bases ATGGAAGAAACCTGGCAAGTACTACTAAAGCAAAAAATAGAAAATAAATACATTCAAAACCCTAACGCTAAAGAATGGGT TGATGTAAATTTTTCCACCTCAGGTTTGCTCAATTTAACTTTAGTTAGTAATAACTTTTTTGGTTTATCTATCCCTAAAC GGAAAGAAGAAATCTCCAACTTGCTAAAATCTCAAGCGCCTCATTTATCTCCTGGGTTTCTTTCCTTATATACACCTCAA GAAGCTGAATCATTAAATATTTCACCTCCACAAATCTCTGATACACTCTCGCCCATTGATTGGCAAGATTTAGCTAATCA GGCAGCAAACCCACAAGATCAACCTCAACTACCCCAGCAAGAACCCAGTACACCCAGAACAGTAACATTTTATTCTTTTA AAGGAGGAGTAGGTCGGACTACTGCATTAACTCATGTGGCTTCAATTTTAGCCATGCGAGGCCATAAAGTTGTAGCTATA GACTTAGATTTAGAAGCACCTGGGTTAACTACAGCATTTAAGCTTAAGCAACAGCCAAAATATGGAATAGTTGATTATTT CTACGAACGTTCCTACTTACCAGATGAAGTAGACCCCAGTGTTTTAATTACAGAAATATTTGGTGAGGCAAAAATACCTA ATGCTACAGGGAGAGTATTTGTTGTTCCTGCTGGATATCTTAGTCTTGATTATATGTCTAAAGTTGGCGATCTTTATGCC ACAACTGTTATAGATGGAAATCAAAATCTTTGGTCTATTTTTAAGCAGGAAATTCAGGAACAATTAAAACCAGATTTTCT CTTAATTGACTCAAGAACTGGAATTAATCAATGGAGTGCTTTATCATTAATTCAAGCTGCTGATGAAGCAATTATTTTTC TTTTCCCTAACGAACAAAACAAACAGGGAATGGAGTTAATACTAAAATCTCTTCAAAGTCTGAAAAATCTATCCATTAAT TTTGTTTTTTCCCCTGTACCTGATGTAGCAAAAAGTGGTTTAGATAAAGTTAAAAAAATTTGGAATTTTTTGCTTGAAAG CATACAAAATCCAAAAGATGAAAAGTATGATACTGATGATGATGATGATGATGATTCAAATACAACTAATGACATATCAG AAAATAACGATGAATTATTAGTAGTGCCTTACCTTGAAACAATTGCTTTAGCTGATAGCTATCCCATACCACATATACAG AATTACTATAGTAAAATTGCCAATCTAATTGATGCCAAAACTAATGAAATTAAACGCAGCAGTATTTTTAATACTAGTGA ACAAAGATGGCAAATTATTGAAAGTCTCGAGTTTGCTGAAGTAAATGCGGCTGACCAGAAGCAGGACCTAGGATTATTGT TTCAACGTACTACTGATTTTGACAAATTTTTAGACGATACAACCTGTCTAATTAGAGGAAAAAAAGGAACAGGTAAAACT GCTCTATATTGGCTATTTTTACAACATCAAGAAGTCGCTCAAAAATTAGCTTACAGAGGGTTAGATAATATTAATACTAA ATTTGAATTTTTCTCAGGACACGGTAGATTTCAAAAAAGTCGTCCAACCCGTGATGAATTTCAATATATTCATCAAAAAT TGCAGGAAAATAATGGGACATGGGAAGCTTTTTGGAGAGCTTATTTACTATTTAGATGTTATCAGGAAAGATTACTAAAA TTTCCCAGAGGTAAGAAAGGAGAAAAGTTTAGTGAGTTAAAAAAAATCATAAATAATTTACCAAAAGATAGATGGGAGGC GCAATCAACAACTGAAGCTTTATTAGAATTATCTACCAACTCTCAATTGATACTTACAGTCAAAGAAGCAATAGAGATTA TTCTTAATCAAGAGGCGAAAAAAAATTCTAAAAAATACTGGTTTCTTTATGATGACTTAGATGAAGATTTTCCAAAAGCA GAAGAATTAGGACAACAAGCATTAACTGGATTATTTCAATTAGTTCAGTCTTGTGATGCGAGTAGACTAACAGAAATTAG ATTTAAAATTTTCTTGAGAGAAGATATTTGGAATCGTTTAATTTTTGATAATAAAAGTCATTTTACGGGAAGGGAGATTA TTTTACAGTGGAGTTCAATAGACTTTTTACGTTTAGCCCTTCGTCAAGCAATACAATCTAAAAAATTCAAAGATTTAGTT GACCGAGTTTATCCTGTTGCTATTGACAGAATAGATCAAGCTAGTGAAGAAGAGCTTGAGCAAGCATTAGAATTACTTTG GGGAAGTCGTCGCCGACGAGGAAATAGAGCGAAAAAAGTATCTCAATGGGTTTATGAAAGATTAACAGACTTAAGTGGCA CGACTTTTCCTCGGAGTTTAAGTATATTACTTAAAGAAGCAAAAGAAAAAGAATTAAGTAATAAAGGAAAGTCATCAACT AAAATTCGTACAGACCGTCTCTTTCAAGGAAAATCTCTAGAATTAGGGTTAAAAAAAGCATCAGAAAAGCGATGTGAAGA AATTAAAGAGGAATATCCAAACTATATTAATTTCTTTGATTCTCTTAACGGAAAACTAGCTTTGTTAAAAAAAGAAGAAT TGAAAGCAATATGGAAGGATTCGGCAGAGGATATTGTCGGAAATTTTGAAGAATTTGCTTCTTTGTTAAGTGAAATAGGT ATGATTGAATTTCGGGAGAAAGAAGAATGCTATAAATTTGCGGATATATATATTTATGGTTTTAATATGATTCGTAAAGG AACAATATAG
Upstream 100 bases:
>100_bases ATTGAAGCTGACAATATAAATTATGAAAGCTGGTTTAAAACATATACAAGGCTTATAGAATGGCTACAAAAACAAGCCAC TATACTTTAAGGAGGTTGAA
Downstream 100 bases:
>100_bases AAATTTGTAAGCAAGCACACAAAATTAATTACTCCTATATGTAAGATTGAACTTTTTATACTATAAACTATCATTCAAAA TAGAGTAGGTAAATAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 909; Mature: 909
Protein sequence:
>909_residues MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISNLLKSQAPHLSPGFLSLYTPQ EAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQEPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAI DLDLEAPGLTTAFKLKQQPKYGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQNKQGMELILKSLQSLKNLSIN FVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDDDDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQ NYYSKIANLIDAKTNEIKRSSIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGTWEAFWRAYLLFRCYQERLLK FPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTNSQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKA EELGQQALTGLFQLVQSCDASRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSLSILLKEAKEKELSNKGKSST KIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFDSLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIG MIEFREKEECYKFADIYIYGFNMIRKGTI
Sequences:
>Translated_909_residues MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISNLLKSQAPHLSPGFLSLYTPQ EAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQEPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAI DLDLEAPGLTTAFKLKQQPKYGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQNKQGMELILKSLQSLKNLSIN FVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDDDDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQ NYYSKIANLIDAKTNEIKRSSIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGTWEAFWRAYLLFRCYQERLLK FPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTNSQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKA EELGQQALTGLFQLVQSCDASRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSLSILLKEAKEKELSNKGKSST KIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFDSLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIG MIEFREKEECYKFADIYIYGFNMIRKGTI >Mature_909_residues MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISNLLKSQAPHLSPGFLSLYTPQ EAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQEPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAI DLDLEAPGLTTAFKLKQQPKYGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQNKQGMELILKSLQSLKNLSIN FVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDDDDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQ NYYSKIANLIDAKTNEIKRSSIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGTWEAFWRAYLLFRCYQERLLK FPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTNSQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKA EELGQQALTGLFQLVQSCDASRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSLSILLKEAKEKELSNKGKSST KIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFDSLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIG MIEFREKEECYKFADIYIYGFNMIRKGTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104772; Mature: 104772
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISN CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCEEECCCCHHHHHHHH LLKSQAPHLSPGFLSLYTPQEAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQ HHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC EPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAIDLDLEAPGLTTAFKLKQQPK CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCC YGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA CCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHEE TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQN EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCC KQGMELILKSLQSLKNLSINFVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDD CHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQNYYSKIANLIDAKTNEIKRS CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCE ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGT EEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCH WEAFWRAYLLFRCYQERLLKFPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTN HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC SQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKAEELGQQALTGLFQLVQSCDA CEEEEEHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH SRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHH DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH SILLKEAKEKELSNKGKSSTKIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFD HHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH SLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIGMIEFREKEECYKFADIYIYG CCCCCEEEEEHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCEEECCHHHHHHHHHEEEEE FNMIRKGTI EHHHHCCCC >Mature Secondary Structure MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISN CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCEEECCCCHHHHHHHH LLKSQAPHLSPGFLSLYTPQEAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQ HHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC EPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAIDLDLEAPGLTTAFKLKQQPK CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCC YGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA CCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHEE TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQN EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCC KQGMELILKSLQSLKNLSINFVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDD CHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQNYYSKIANLIDAKTNEIKRS CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCE ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGT EEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCH WEAFWRAYLLFRCYQERLLKFPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTN HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC SQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKAEELGQQALTGLFQLVQSCDA CEEEEEHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH SRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHH DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH SILLKEAKEKELSNKGKSSTKIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFD HHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH SLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIGMIEFREKEECYKFADIYIYG CCCCCEEEEEHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCEEECCHHHHHHHHHEEEEE FNMIRKGTI EHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA