| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475237
Identifier: 113475237
GI number: 113475237
Start: 2353054
End: 2353818
Strand: Direct
Name: 113475237
Synonym: Tery_1545
Alternate gene names: NA
Gene position: 2353054-2353818 (Clockwise)
Preceding gene: 113475236
Following gene: 113475238
Centisome position: 30.36
GC content: 43.53
Gene sequence:
>765_bases ATGGTTTTAACTGCCCAACAACTAGAGGCAATAATGCCAGATGCTACTCAACTAGAAAGTGAGGAGCCAGAGATGGAAAG CTCTCAACACTATATGCAACTGATATTGCTGGTCATTTGCCTAGAATGGCTGTGGCGCAATAGTAATGATTACTTTATCG GTGCTAACCTCACTATTTATTACAGTCGACAGCAACTAAAAAATCGTGATTTTCGGGGTCCTGACTTTTTCTTGGTGAAG CAAACCCAGAAGCGACCTCGCAAGTCCTGGGTAGTTTGGGAGGAAAACGGTCAATATCCTAATTTAATTATTGAGTTACT ATCGGGCTCTACTGCTAAGGTGGATCGCAATTTGAAAAAAGGGTTATATCAAGATAATTTCCGCACCCCAGAATATTTTT GGTTTGACCCGGAAACATTGGAGTTTATGGGGTTTCGTCTACAAAATAATCAGTATGAAGAAATTCAGTTGAATAACCAA GGTTGGCGTTGGAGTCAAGAATTAGAACTATACTTGGGTGTTGATGAAAGTCAATTACGTTATTTTACTGCTAATGGTGA ACGGGTCCCAACTCCCCAGGAAGCAATGAGACAAGAACAGTTGGTAGCTAGACAGGCTCGGTTACAGGCTGAACAAGAGC GAGAGCGGGCTCAAAAAGCTGAGTCTCAAGCCAAAAAAGCTCAGTTACAGGCTGAACAGGAGCGAGAGCGGGGAGAACGC CTAGCTCAACGGCTGCGAGAACTGGGTGTCGATGCTGAACTATAA
Upstream 100 bases:
>100_bases CCTGCTACCTAATACCTAATACCTAACACCTAAAACCTGCTACCTAACATTGCTATGCTATAATTTCAATCATTCCTAAT TAGTTATAAGGTGAAGGTCA
Downstream 100 bases:
>100_bases GTTACTGGATAAGTTAGAGCTTCCGCAAATTCACATAAGGACTCTTATCTTTAAACTGCTAACACCTGCGACCTAAAACC TAATACCTAAACTAACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MVLTAQQLEAIMPDATQLESEEPEMESSQHYMQLILLVICLEWLWRNSNDYFIGANLTIYYSRQQLKNRDFRGPDFFLVK QTQKRPRKSWVVWEENGQYPNLIIELLSGSTAKVDRNLKKGLYQDNFRTPEYFWFDPETLEFMGFRLQNNQYEEIQLNNQ GWRWSQELELYLGVDESQLRYFTANGERVPTPQEAMRQEQLVARQARLQAEQERERAQKAESQAKKAQLQAEQERERGER LAQRLRELGVDAEL
Sequences:
>Translated_254_residues MVLTAQQLEAIMPDATQLESEEPEMESSQHYMQLILLVICLEWLWRNSNDYFIGANLTIYYSRQQLKNRDFRGPDFFLVK QTQKRPRKSWVVWEENGQYPNLIIELLSGSTAKVDRNLKKGLYQDNFRTPEYFWFDPETLEFMGFRLQNNQYEEIQLNNQ GWRWSQELELYLGVDESQLRYFTANGERVPTPQEAMRQEQLVARQARLQAEQERERAQKAESQAKKAQLQAEQERERGER LAQRLRELGVDAEL >Mature_254_residues MVLTAQQLEAIMPDATQLESEEPEMESSQHYMQLILLVICLEWLWRNSNDYFIGANLTIYYSRQQLKNRDFRGPDFFLVK QTQKRPRKSWVVWEENGQYPNLIIELLSGSTAKVDRNLKKGLYQDNFRTPEYFWFDPETLEFMGFRLQNNQYEEIQLNNQ GWRWSQELELYLGVDESQLRYFTANGERVPTPQEAMRQEQLVARQARLQAEQERERAQKAESQAKKAQLQAEQERERGER LAQRLRELGVDAEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30277; Mature: 30277
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTAQQLEAIMPDATQLESEEPEMESSQHYMQLILLVICLEWLWRNSNDYFIGANLTIY CCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEE YSRQQLKNRDFRGPDFFLVKQTQKRPRKSWVVWEENGQYPNLIIELLSGSTAKVDRNLKK EEHHHHCCCCCCCCCEEEEECHHCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH GLYQDNFRTPEYFWFDPETLEFMGFRLQNNQYEEIQLNNQGWRWSQELELYLGVDESQLR CCCCCCCCCCCEEEECCCHHHHHEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHEE YFTANGERVPTPQEAMRQEQLVARQARLQAEQERERAQKAESQAKKAQLQAEQERERGER EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQRLRELGVDAEL HHHHHHHCCCCCCC >Mature Secondary Structure MVLTAQQLEAIMPDATQLESEEPEMESSQHYMQLILLVICLEWLWRNSNDYFIGANLTIY CCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEE YSRQQLKNRDFRGPDFFLVKQTQKRPRKSWVVWEENGQYPNLIIELLSGSTAKVDRNLKK EEHHHHCCCCCCCCCEEEEECHHCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH GLYQDNFRTPEYFWFDPETLEFMGFRLQNNQYEEIQLNNQGWRWSQELELYLGVDESQLR CCCCCCCCCCCEEEECCCHHHHHEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHEE YFTANGERVPTPQEAMRQEQLVARQARLQAEQERERAQKAESQAKKAQLQAEQERERGER EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQRLRELGVDAEL HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA