Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475198

Identifier: 113475198

GI number: 113475198

Start: 2283508

End: 2284245

Strand: Reverse

Name: 113475198

Synonym: Tery_1500

Alternate gene names: NA

Gene position: 2284245-2283508 (Counterclockwise)

Preceding gene: 113475202

Following gene: 113475196

Centisome position: 29.47

GC content: 33.74

Gene sequence:

>738_bases
ATGGTCAATGTCAATAATATTAAAACAAATATAGTGGCGATCGCCGCAGTTGCCCTGAGTATTTTTAGCACTCCCCTGGC
ACTTGCGGAAAACTACACTAGAGAATTTGACGAACAAGGGTATTTACGTCAAAATCCTGATGTAGCAAAGTTAGTAAGTC
AAGGGAAATACCGCTCTGGTTATGAACATTATGTCAGATCTGGGCAATATGAAAATCGCTCTGGTGCTTTCAAAACATTC
GCAGAACTTGAATATTTGCGACAAAACCCTGATGTAGTAGATGCTTTACGCCGTGGTAAATTTAAGTCTGCTTACGATCA
TTATCTCAAACATGGTCAATATGAAAACCGTTCTGGTGCTTCTTACTCAAAATACCCATCACAACCTCAAGCATTAAATG
ATTATTATAACCAATCTTTTATGACTCAGAATAATAGGAATTGTGAAGGCATAAACTATAATTTATCTCAGGAAGCATTT
TTCCAAACAGAGAATCGAACTATCCATATTTGTCGATATCAAAATAGCAATAAATTAGTTTTGTTTGAACGAATAAATGG
AGATAATTCTGGTTGGATAAATTTTCCTGTAAAATTTGCTGATAATGGTTTTGCTAATCCTAGTATGGGTTATTTTATTA
ATGATAATGAATTTATTCGTAGACGAGGAAATCAAATGCTTGATAGAGAAAAAGTTGTAACTAAATTGAGATATAATTAC
CGTAAAGTATATCCTTAA

Upstream 100 bases:

>100_bases
GTACATTGAAAAATTTTTAACTCCCTAAAATTCTCCACAGTCTTTAAGCCTCAAAGGATATCTTGATAATTAAGAACAAT
GATTTTTGAGGTATAAATAA

Downstream 100 bases:

>100_bases
ATTTACCAGCTATTTCCTATTGTTCAATAAGTAAAAATTTAAAGGTTTTAACAAGAGTAAAATAACTAAACAAGAAACAG
GACTTATTTTCATAATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVNVNNIKTNIVAIAAVALSIFSTPLALAENYTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSGAFKTF
AELEYLRQNPDVVDALRRGKFKSAYDHYLKHGQYENRSGASYSKYPSQPQALNDYYNQSFMTQNNRNCEGINYNLSQEAF
FQTENRTIHICRYQNSNKLVLFERINGDNSGWINFPVKFADNGFANPSMGYFINDNEFIRRRGNQMLDREKVVTKLRYNY
RKVYP

Sequences:

>Translated_245_residues
MVNVNNIKTNIVAIAAVALSIFSTPLALAENYTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSGAFKTF
AELEYLRQNPDVVDALRRGKFKSAYDHYLKHGQYENRSGASYSKYPSQPQALNDYYNQSFMTQNNRNCEGINYNLSQEAF
FQTENRTIHICRYQNSNKLVLFERINGDNSGWINFPVKFADNGFANPSMGYFINDNEFIRRRGNQMLDREKVVTKLRYNY
RKVYP
>Mature_245_residues
MVNVNNIKTNIVAIAAVALSIFSTPLALAENYTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSGAFKTF
AELEYLRQNPDVVDALRRGKFKSAYDHYLKHGQYENRSGASYSKYPSQPQALNDYYNQSFMTQNNRNCEGINYNLSQEAF
FQTENRTIHICRYQNSNKLVLFERINGDNSGWINFPVKFADNGFANPSMGYFINDNEFIRRRGNQMLDREKVVTKLRYNY
RKVYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28634; Mature: 28634

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNVNNIKTNIVAIAAVALSIFSTPLALAENYTREFDEQGYLRQNPDVAKLVSQGKYRSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
YEHYVRSGQYENRSGAFKTFAELEYLRQNPDVVDALRRGKFKSAYDHYLKHGQYENRSGA
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCC
SYSKYPSQPQALNDYYNQSFMTQNNRNCEGINYNLSQEAFFQTENRTIHICRYQNSNKLV
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCEEEEEEECCCCCEE
LFERINGDNSGWINFPVKFADNGFANPSMGYFINDNEFIRRRGNQMLDREKVVTKLRYNY
EEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCHHHHHHHCHHHHHHHHHHHHHHHHH
RKVYP
HCCCC
>Mature Secondary Structure
MVNVNNIKTNIVAIAAVALSIFSTPLALAENYTREFDEQGYLRQNPDVAKLVSQGKYRSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
YEHYVRSGQYENRSGAFKTFAELEYLRQNPDVVDALRRGKFKSAYDHYLKHGQYENRSGA
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCC
SYSKYPSQPQALNDYYNQSFMTQNNRNCEGINYNLSQEAFFQTENRTIHICRYQNSNKLV
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCEEEEEEECCCCCEE
LFERINGDNSGWINFPVKFADNGFANPSMGYFINDNEFIRRRGNQMLDREKVVTKLRYNY
EEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCHHHHHHHCHHHHHHHHHHHHHHHHH
RKVYP
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA