| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475182
Identifier: 113475182
GI number: 113475182
Start: 2251946
End: 2253229
Strand: Reverse
Name: 113475182
Synonym: Tery_1481
Alternate gene names: NA
Gene position: 2253229-2251946 (Counterclockwise)
Preceding gene: 113475183
Following gene: 113475181
Centisome position: 29.07
GC content: 38.16
Gene sequence:
>1284_bases ATGAGAAACAGGTACAATGAAACTGAGATTCCTTTGCCACAAATAAAAATGACTCAAAATTCCTTTATTGAAATCTTACA AGTCCAAAAATTGTCTCAAGAATCTGAATCATTAATCGGATTTAATATAGACTCGCTCCAGAAAGGTAAAAAAATAGATA ATTATTCAATTTCAATTGTAGGCTGGGTATTAGGTAAGGGATCACCTGCAGTTGCAGTAGAATTTCTTAATGGAGGAAAA GTATTACAGAAAGTTCCGGTCAGTAAGTCCCGTCCGGGAGTAGAAAAACGTTTCCCAAAAGTGAGCGAAGCCAAAAGTAG CGGTTTTGCTGCAGCAGTAGGGGTATTGGGATTGCCTCCGGTAGCTAACTTAAAATTGCGGTGTTTGTTGGCTGACGGCA CTATTGTTCCCTTAGCAGATATAAAATTTCGCCATGAACCCCTGGATTCTGGTTATCAACCAAGATTGCAACCTTTAGTA TTAAATTCTACGGGGCGATCGGGAAGTACTTGGTTTATGCGGTTGCTTTCCCAACATCCAGCAATTGTAGCTTGTCCAAT ATATGCTTATGAAACCAGAGTATGGCCTTTTTGGATGCAATTGCTGCAATTTTTGTCTCAAAGAGCTAATCCGATAGAAA CTCCTTTTCAAGCAGATTATCCACCAAAAGCAGCAGCTTTCTGTCAGGAAACTTTGGATGCTTTTTACGAACATATAGCG GAAGCTCAAGGTAAGATAATTTCTTCTTCTGAATTAACTTATTTTGTAGAAAAGAATGCTTTTAATCCTAATCTTGACTT ATTAACAGAAATTTATCCCCAGGCTAAAGAAATAATTCTGGTTCGGGATTTTCGAGATGTAGCTTCTTCAATATTAGCCT TTAATAAGAAACGAGGTAACGATGGTTTTAGTCGCAATAAGTTTAAAAGTGATGAGGAATATATTAAAGGAGTTATGAAA AATGCGTCATCTGGTTTGCGGGAGCGGTGGAAGAAGCGCAGACAAGAAGCATATTTAGTCCATTACGAAGATTTAATTCT CTCCCCAGAAAAAACTTTAAAGGGAGCTCTAGAATATTTAAACTTAGATAACTCTCAGGAGGCGATCGCTAATATGCTAG AAAAAGCATCGGAAAATACTGCCTATACCCAATGGCATCAAACTAGCTCTAACGCTAAAGACTCTATCGGAAGGTGGCGG CAAGATCTAGAACCTTCCCTGCAAAAATTATGCAATCGGGTTTTAGCTGATGCTTTGCGAGAATTTGGATATTCTGTTAA CTAA
Upstream 100 bases:
>100_bases TATTTTTCACTACTTTATGGCTTTGACAATAAGGACAATCCATCTCTCAATAAAATTCTAGAATATCATTCTCTATTGTG CAACACCCATATTTTTTTGT
Downstream 100 bases:
>100_bases AAAAGGGTTAATAACCCTCATTTATTATCATAAAAGTCAAGCTTCGGTCTGCTACTATGACCCAAAGAAATCAAACTATA AAACCTGATCGTACTAATAT
Product: sulfotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MRNRYNETEIPLPQIKMTQNSFIEILQVQKLSQESESLIGFNIDSLQKGKKIDNYSISIVGWVLGKGSPAVAVEFLNGGK VLQKVPVSKSRPGVEKRFPKVSEAKSSGFAAAVGVLGLPPVANLKLRCLLADGTIVPLADIKFRHEPLDSGYQPRLQPLV LNSTGRSGSTWFMRLLSQHPAIVACPIYAYETRVWPFWMQLLQFLSQRANPIETPFQADYPPKAAAFCQETLDAFYEHIA EAQGKIISSSELTYFVEKNAFNPNLDLLTEIYPQAKEIILVRDFRDVASSILAFNKKRGNDGFSRNKFKSDEEYIKGVMK NASSGLRERWKKRRQEAYLVHYEDLILSPEKTLKGALEYLNLDNSQEAIANMLEKASENTAYTQWHQTSSNAKDSIGRWR QDLEPSLQKLCNRVLADALREFGYSVN
Sequences:
>Translated_427_residues MRNRYNETEIPLPQIKMTQNSFIEILQVQKLSQESESLIGFNIDSLQKGKKIDNYSISIVGWVLGKGSPAVAVEFLNGGK VLQKVPVSKSRPGVEKRFPKVSEAKSSGFAAAVGVLGLPPVANLKLRCLLADGTIVPLADIKFRHEPLDSGYQPRLQPLV LNSTGRSGSTWFMRLLSQHPAIVACPIYAYETRVWPFWMQLLQFLSQRANPIETPFQADYPPKAAAFCQETLDAFYEHIA EAQGKIISSSELTYFVEKNAFNPNLDLLTEIYPQAKEIILVRDFRDVASSILAFNKKRGNDGFSRNKFKSDEEYIKGVMK NASSGLRERWKKRRQEAYLVHYEDLILSPEKTLKGALEYLNLDNSQEAIANMLEKASENTAYTQWHQTSSNAKDSIGRWR QDLEPSLQKLCNRVLADALREFGYSVN >Mature_427_residues MRNRYNETEIPLPQIKMTQNSFIEILQVQKLSQESESLIGFNIDSLQKGKKIDNYSISIVGWVLGKGSPAVAVEFLNGGK VLQKVPVSKSRPGVEKRFPKVSEAKSSGFAAAVGVLGLPPVANLKLRCLLADGTIVPLADIKFRHEPLDSGYQPRLQPLV LNSTGRSGSTWFMRLLSQHPAIVACPIYAYETRVWPFWMQLLQFLSQRANPIETPFQADYPPKAAAFCQETLDAFYEHIA EAQGKIISSSELTYFVEKNAFNPNLDLLTEIYPQAKEIILVRDFRDVASSILAFNKKRGNDGFSRNKFKSDEEYIKGVMK NASSGLRERWKKRRQEAYLVHYEDLILSPEKTLKGALEYLNLDNSQEAIANMLEKASENTAYTQWHQTSSNAKDSIGRWR QDLEPSLQKLCNRVLADALREFGYSVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48232; Mature: 48232
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRYNETEIPLPQIKMTQNSFIEILQVQKLSQESESLIGFNIDSLQKGKKIDNYSISIV CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCEEEEE GWVLGKGSPAVAVEFLNGGKVLQKVPVSKSRPGVEKRFPKVSEAKSSGFAAAVGVLGLPP EEEECCCCCEEEEEEECCCHHHHHCCCCCCCCCHHHHCCCHHHHHCCCHHHHHHHHCCCC VANLKLRCLLADGTIVPLADIKFRHEPLDSGYQPRLQPLVLNSTGRSGSTWFMRLLSQHP CCCCEEEEEEECCCEEEECCCEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC AIVACPIYAYETRVWPFWMQLLQFLSQRANPIETPFQADYPPKAAAFCQETLDAFYEHIA CEEEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EAQGKIISSSELTYFVEKNAFNPNLDLLTEIYPQAKEIILVRDFRDVASSILAFNKKRGN HHCCCEECCCCEEEEEECCCCCCCHHHHHHHCCCHHHEEEEECHHHHHHHHHHHHCCCCC DGFSRNKFKSDEEYIKGVMKNASSGLRERWKKRRQEAYLVHYEDLILSPEKTLKGALEYL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCCCHHHHHHHHHHH NLDNSQEAIANMLEKASENTAYTQWHQTSSNAKDSIGRWRQDLEPSLQKLCNRVLADALR CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFGYSVN HCCCCCC >Mature Secondary Structure MRNRYNETEIPLPQIKMTQNSFIEILQVQKLSQESESLIGFNIDSLQKGKKIDNYSISIV CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCEEEEE GWVLGKGSPAVAVEFLNGGKVLQKVPVSKSRPGVEKRFPKVSEAKSSGFAAAVGVLGLPP EEEECCCCCEEEEEEECCCHHHHHCCCCCCCCCHHHHCCCHHHHHCCCHHHHHHHHCCCC VANLKLRCLLADGTIVPLADIKFRHEPLDSGYQPRLQPLVLNSTGRSGSTWFMRLLSQHP CCCCEEEEEEECCCEEEECCCEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC AIVACPIYAYETRVWPFWMQLLQFLSQRANPIETPFQADYPPKAAAFCQETLDAFYEHIA CEEEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EAQGKIISSSELTYFVEKNAFNPNLDLLTEIYPQAKEIILVRDFRDVASSILAFNKKRGN HHCCCEECCCCEEEEEECCCCCCCHHHHHHHCCCHHHEEEEECHHHHHHHHHHHHCCCCC DGFSRNKFKSDEEYIKGVMKNASSGLRERWKKRRQEAYLVHYEDLILSPEKTLKGALEYL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCCCHHHHHHHHHHH NLDNSQEAIANMLEKASENTAYTQWHQTSSNAKDSIGRWRQDLEPSLQKLCNRVLADALR CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFGYSVN HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA