| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475181
Identifier: 113475181
GI number: 113475181
Start: 2250045
End: 2251889
Strand: Reverse
Name: 113475181
Synonym: Tery_1480
Alternate gene names: NA
Gene position: 2251889-2250045 (Counterclockwise)
Preceding gene: 113475182
Following gene: 113475180
Centisome position: 29.06
GC content: 30.35
Gene sequence:
>1845_bases ATGACCCAAAGAAATCAAACTATAAAACCTGATCGTACTAATATAGAAATTATTTCAATTCATATACCAAGAACTGCTGG TACTGCATTTAAGGGTGTTATTAGACAGGTATATAGCTCAGAAGAAATTTTCTTTGACTACCCTCACAAAGGTCAGATTC GGAATCGGATGTTAACCAAACAAAAGCCAGAAGTCAAAATAATTCATGGTCATTTTCCTGCTCCAAAATATAATCAAAAA TTTCCGGGAGCTAAAAAAATTATTTGGCTGAGGAATCCGATCAAGCGGTTAGTTTCTCTTTACTTTTTTTGGAAGAGCTG GCAAATATTACTAGCAAATGATCAAGAATATTTAGGAAATTCCAAAGATACTAATTTGAGTTTTATAGAATTTGCTGAAA AACCAGAAATGCAGAATCTAATCAAATTAAATTTTCTGCAAAACGAGCAACTAAAATATTTTTATTTTGTGGGTATCCAA GAATTTTTTAGTGAGGATTTATATGAACTTAAGGTAATGTTAGATTGGTCAGAGTATGAATTAGAAGCTCCAAATACTAA TCCTTATTTAGAATATAAATTATTAATTAAAGAAGTATTATCTAACCAAGAAATAGTCGGTAAAATATCAGCCATAAATC ACGAAGATATAGAAATTTATCAAGAAGCATTAAGTTTACGGGAGCGGCGGAAAAAAACATCAGAGATACAATACTATACT CAAAATAACTCTGAAAAGAAAGATATTATTGGCAAGAAACGAAAAATTAATCCTTTACTTACTTGGGGTTCTATCGATCG GGTAATACTTAAAAATCAAGTTTTATATTTATCTGGTTGGGTTGCCTCCTTAGATGCTGGTATGGTGCAAGGATTTAAAG TTTCTGTTGGGAATCAAGATTTTAGTTTCTTTGAACAAACTCTGAATATACCTAGTCCAGATGTGGAAAAAATTCACCCT AGTTTATCTGGTGCAGGTAATGCTAGATTCCGCATAAAAGTTCTTTTAAATCAAGAACAAATTAATCAAATAAAACATTC ATTAATTTGTTTGATTCCTCTGTTTAATAGGGGTGAGGGTATAGTTATATTAACAGCATTAACACCTCTTTTACCACTGC CAGATAGGGAATATCTAGAAATAGTTGGGAAAGATATTAGTAATCAATTTATTAATAATTCCTTCAAGTTATTAGGAAGT TTAATTCAAAGATTAGGTTTACAACCAACAGACTATATTCTTGATATTGGTTGCAATATTGGTACTGTAGCTTATACTTT AGTTCATTATTTACAACCTTCTGGTCGTTATCAAGGTTTTGATATGACGGAAGATTTTATTTCCTTGATAAAACAAGAAA TTACGACTCGTAAGCCGAATTTTAATTTTAACTGGTACAATATTTATCACTGTATCTACAATTCTACAGGTAAAATATCT GCCAATGATTTTATTTTTCCTTATCCTAATTCAAGTGTTAATTGTGTTTGTATTTCCCGTTTATTTATTCATTTACAAAG TTCTGTAGTTCGTCATTTTCTTGATGAAATATATAGAGTTTTACAACCGGGAGGGAGATGTTTATTAATTTGCTTTTTAA TTAATTCAGAATCAGAAGAGTTGATTACTAAAGGTAAAAGTTCTCAACAGCTTATTTATGAAATAGAGGATGGTTTTACT ATAGATATTAATCTGCCAGAGAAAGGGATTGGTTTTAGGGAAAATCTAATATTACAATGGATAGAAGAACGAGGCTTTAA TGTTCTAGAAAAATCTTATGGTTCTTGGTGTGGTCGGACTTCATCTATTAAAGAAGATTTGTTAGTATTGGAAAAAAGTT TTTAA
Upstream 100 bases:
>100_bases TTTTAGCTGATGCTTTGCGAGAATTTGGATATTCTGTTAACTAAAAAAGGGTTAATAACCCTCATTTATTATCATAAAAG TCAAGCTTCGGTCTGCTACT
Downstream 100 bases:
>100_bases GAGGGAACAGGAAACGGAAAGTAGAAGTCGTAGGGTTAGCAAATATTCAGCAATAGACACTCATGTAAATTAACTAATAC AGCAGATTCTACCAAGGTAG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MTQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTKQKPEVKIIHGHFPAPKYNQK FPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGNSKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQ EFFSEDLYELKVMLDWSEYELEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQDFSFFEQTLNIPSPDVEKIHP SLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEGIVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGS LIQRLGLQPTDYILDIGCNIGTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEELITKGKSSQQLIYEIEDGFT IDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRTSSIKEDLLVLEKSF
Sequences:
>Translated_614_residues MTQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTKQKPEVKIIHGHFPAPKYNQK FPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGNSKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQ EFFSEDLYELKVMLDWSEYELEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQDFSFFEQTLNIPSPDVEKIHP SLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEGIVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGS LIQRLGLQPTDYILDIGCNIGTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEELITKGKSSQQLIYEIEDGFT IDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRTSSIKEDLLVLEKSF >Mature_613_residues TQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTKQKPEVKIIHGHFPAPKYNQKF PGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGNSKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQE FFSEDLYELKVMLDWSEYELEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYTQ NNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQDFSFFEQTLNIPSPDVEKIHPS LSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEGIVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGSL IQRLGLQPTDYILDIGCNIGTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKISA NDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEELITKGKSSQQLIYEIEDGFTI DINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRTSSIKEDLLVLEKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To R.meliloti expE3 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 71237; Mature: 71106
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTK CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCC QKPEVKIIHGHFPAPKYNQKFPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGN CCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHCCC SKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQEFFSEDLYELKVMLDWSEYE CCCCCEEEEEECCCCCHHHHEEEEEECCCCEEEEEEEEHHHHHCCCCEEEEEEEECCCEE LEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT EECCCCCCCHHHHHHHHHHHCCCHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQD CCCCCHHHHCCCCCCCCCEEECCCCCHHHHHCCEEEEECHHHHHHHHHHCCEEEEECCCC FSFFEQTLNIPSPDVEKIHPSLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEG HHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEEECCCCC IVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGSLIQRLGLQPTDYILDIGCNI EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCH GTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEE CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH LITKGKSSQQLIYEIEDGFTIDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRT HHHCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC SSIKEDLLVLEKSF CHHHHHHHHHCCCC >Mature Secondary Structure TQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTK CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCC QKPEVKIIHGHFPAPKYNQKFPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGN CCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHCCC SKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQEFFSEDLYELKVMLDWSEYE CCCCCEEEEEECCCCCHHHHEEEEEECCCCEEEEEEEEHHHHHCCCCEEEEEEEECCCEE LEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT EECCCCCCCHHHHHHHHHHHCCCHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQD CCCCCHHHHCCCCCCCCCEEECCCCCHHHHHCCEEEEECHHHHHHHHHHCCEEEEECCCC FSFFEQTLNIPSPDVEKIHPSLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEG HHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEEECCCCC IVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGSLIQRLGLQPTDYILDIGCNI EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCH GTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEE CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH LITKGKSSQQLIYEIEDGFTIDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRT HHHCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC SSIKEDLLVLEKSF CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]