Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475181

Identifier: 113475181

GI number: 113475181

Start: 2250045

End: 2251889

Strand: Reverse

Name: 113475181

Synonym: Tery_1480

Alternate gene names: NA

Gene position: 2251889-2250045 (Counterclockwise)

Preceding gene: 113475182

Following gene: 113475180

Centisome position: 29.06

GC content: 30.35

Gene sequence:

>1845_bases
ATGACCCAAAGAAATCAAACTATAAAACCTGATCGTACTAATATAGAAATTATTTCAATTCATATACCAAGAACTGCTGG
TACTGCATTTAAGGGTGTTATTAGACAGGTATATAGCTCAGAAGAAATTTTCTTTGACTACCCTCACAAAGGTCAGATTC
GGAATCGGATGTTAACCAAACAAAAGCCAGAAGTCAAAATAATTCATGGTCATTTTCCTGCTCCAAAATATAATCAAAAA
TTTCCGGGAGCTAAAAAAATTATTTGGCTGAGGAATCCGATCAAGCGGTTAGTTTCTCTTTACTTTTTTTGGAAGAGCTG
GCAAATATTACTAGCAAATGATCAAGAATATTTAGGAAATTCCAAAGATACTAATTTGAGTTTTATAGAATTTGCTGAAA
AACCAGAAATGCAGAATCTAATCAAATTAAATTTTCTGCAAAACGAGCAACTAAAATATTTTTATTTTGTGGGTATCCAA
GAATTTTTTAGTGAGGATTTATATGAACTTAAGGTAATGTTAGATTGGTCAGAGTATGAATTAGAAGCTCCAAATACTAA
TCCTTATTTAGAATATAAATTATTAATTAAAGAAGTATTATCTAACCAAGAAATAGTCGGTAAAATATCAGCCATAAATC
ACGAAGATATAGAAATTTATCAAGAAGCATTAAGTTTACGGGAGCGGCGGAAAAAAACATCAGAGATACAATACTATACT
CAAAATAACTCTGAAAAGAAAGATATTATTGGCAAGAAACGAAAAATTAATCCTTTACTTACTTGGGGTTCTATCGATCG
GGTAATACTTAAAAATCAAGTTTTATATTTATCTGGTTGGGTTGCCTCCTTAGATGCTGGTATGGTGCAAGGATTTAAAG
TTTCTGTTGGGAATCAAGATTTTAGTTTCTTTGAACAAACTCTGAATATACCTAGTCCAGATGTGGAAAAAATTCACCCT
AGTTTATCTGGTGCAGGTAATGCTAGATTCCGCATAAAAGTTCTTTTAAATCAAGAACAAATTAATCAAATAAAACATTC
ATTAATTTGTTTGATTCCTCTGTTTAATAGGGGTGAGGGTATAGTTATATTAACAGCATTAACACCTCTTTTACCACTGC
CAGATAGGGAATATCTAGAAATAGTTGGGAAAGATATTAGTAATCAATTTATTAATAATTCCTTCAAGTTATTAGGAAGT
TTAATTCAAAGATTAGGTTTACAACCAACAGACTATATTCTTGATATTGGTTGCAATATTGGTACTGTAGCTTATACTTT
AGTTCATTATTTACAACCTTCTGGTCGTTATCAAGGTTTTGATATGACGGAAGATTTTATTTCCTTGATAAAACAAGAAA
TTACGACTCGTAAGCCGAATTTTAATTTTAACTGGTACAATATTTATCACTGTATCTACAATTCTACAGGTAAAATATCT
GCCAATGATTTTATTTTTCCTTATCCTAATTCAAGTGTTAATTGTGTTTGTATTTCCCGTTTATTTATTCATTTACAAAG
TTCTGTAGTTCGTCATTTTCTTGATGAAATATATAGAGTTTTACAACCGGGAGGGAGATGTTTATTAATTTGCTTTTTAA
TTAATTCAGAATCAGAAGAGTTGATTACTAAAGGTAAAAGTTCTCAACAGCTTATTTATGAAATAGAGGATGGTTTTACT
ATAGATATTAATCTGCCAGAGAAAGGGATTGGTTTTAGGGAAAATCTAATATTACAATGGATAGAAGAACGAGGCTTTAA
TGTTCTAGAAAAATCTTATGGTTCTTGGTGTGGTCGGACTTCATCTATTAAAGAAGATTTGTTAGTATTGGAAAAAAGTT
TTTAA

Upstream 100 bases:

>100_bases
TTTTAGCTGATGCTTTGCGAGAATTTGGATATTCTGTTAACTAAAAAAGGGTTAATAACCCTCATTTATTATCATAAAAG
TCAAGCTTCGGTCTGCTACT

Downstream 100 bases:

>100_bases
GAGGGAACAGGAAACGGAAAGTAGAAGTCGTAGGGTTAGCAAATATTCAGCAATAGACACTCATGTAAATTAACTAATAC
AGCAGATTCTACCAAGGTAG

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MTQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTKQKPEVKIIHGHFPAPKYNQK
FPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGNSKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQ
EFFSEDLYELKVMLDWSEYELEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT
QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQDFSFFEQTLNIPSPDVEKIHP
SLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEGIVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGS
LIQRLGLQPTDYILDIGCNIGTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS
ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEELITKGKSSQQLIYEIEDGFT
IDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRTSSIKEDLLVLEKSF

Sequences:

>Translated_614_residues
MTQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTKQKPEVKIIHGHFPAPKYNQK
FPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGNSKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQ
EFFSEDLYELKVMLDWSEYELEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT
QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQDFSFFEQTLNIPSPDVEKIHP
SLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEGIVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGS
LIQRLGLQPTDYILDIGCNIGTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS
ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEELITKGKSSQQLIYEIEDGFT
IDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRTSSIKEDLLVLEKSF
>Mature_613_residues
TQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTKQKPEVKIIHGHFPAPKYNQKF
PGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGNSKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQE
FFSEDLYELKVMLDWSEYELEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYTQ
NNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQDFSFFEQTLNIPSPDVEKIHPS
LSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEGIVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGSL
IQRLGLQPTDYILDIGCNIGTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKISA
NDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEELITKGKSSQQLIYEIEDGFTI
DINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRTSSIKEDLLVLEKSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti expE3 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 71237; Mature: 71106

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTK
CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCC
QKPEVKIIHGHFPAPKYNQKFPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGN
CCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHCCC
SKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQEFFSEDLYELKVMLDWSEYE
CCCCCEEEEEECCCCCHHHHEEEEEECCCCEEEEEEEEHHHHHCCCCEEEEEEEECCCEE
LEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT
EECCCCCCCHHHHHHHHHHHCCCHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE
QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQD
CCCCCHHHHCCCCCCCCCEEECCCCCHHHHHCCEEEEECHHHHHHHHHHCCEEEEECCCC
FSFFEQTLNIPSPDVEKIHPSLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEG
HHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEEECCCCC
IVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGSLIQRLGLQPTDYILDIGCNI
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCH
GTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC
ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEE
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH
LITKGKSSQQLIYEIEDGFTIDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRT
HHHCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
SSIKEDLLVLEKSF
CHHHHHHHHHCCCC
>Mature Secondary Structure 
TQRNQTIKPDRTNIEIISIHIPRTAGTAFKGVIRQVYSSEEIFFDYPHKGQIRNRMLTK
CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCC
QKPEVKIIHGHFPAPKYNQKFPGAKKIIWLRNPIKRLVSLYFFWKSWQILLANDQEYLGN
CCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHCCC
SKDTNLSFIEFAEKPEMQNLIKLNFLQNEQLKYFYFVGIQEFFSEDLYELKVMLDWSEYE
CCCCCEEEEEECCCCCHHHHEEEEEECCCCEEEEEEEEHHHHHCCCCEEEEEEEECCCEE
LEAPNTNPYLEYKLLIKEVLSNQEIVGKISAINHEDIEIYQEALSLRERRKKTSEIQYYT
EECCCCCCCHHHHHHHHHHHCCCHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE
QNNSEKKDIIGKKRKINPLLTWGSIDRVILKNQVLYLSGWVASLDAGMVQGFKVSVGNQD
CCCCCHHHHCCCCCCCCCEEECCCCCHHHHHCCEEEEECHHHHHHHHHHCCEEEEECCCC
FSFFEQTLNIPSPDVEKIHPSLSGAGNARFRIKVLLNQEQINQIKHSLICLIPLFNRGEG
HHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEEECCCCC
IVILTALTPLLPLPDREYLEIVGKDISNQFINNSFKLLGSLIQRLGLQPTDYILDIGCNI
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCH
GTVAYTLVHYLQPSGRYQGFDMTEDFISLIKQEITTRKPNFNFNWYNIYHCIYNSTGKIS
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC
ANDFIFPYPNSSVNCVCISRLFIHLQSSVVRHFLDEIYRVLQPGGRCLLICFLINSESEE
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH
LITKGKSSQQLIYEIEDGFTIDINLPEKGIGFRENLILQWIEERGFNVLEKSYGSWCGRT
HHHCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
SSIKEDLLVLEKSF
CHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]