| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475171
Identifier: 113475171
GI number: 113475171
Start: 2227883
End: 2228242
Strand: Direct
Name: 113475171
Synonym: Tery_1469
Alternate gene names: NA
Gene position: 2227883-2228242 (Clockwise)
Preceding gene: 113475164
Following gene: 113475175
Centisome position: 28.75
GC content: 35.0
Gene sequence:
>360_bases ATGTTAAATTGTCCTCGTTGCCATCAAGCTGTTGATAGTCAGGCGATCGCTTGTCCGTATTGTCAATTTCCTCTGAAAGC TTTTGGTCATCCTGGTATTCCCCTTTATCAAGCGAAACCAGAAGAATATTTGTGTAATAAATGCTTCTACCATATAGACG ATAGTTGCAATTTTCCCCAACGTCCCTACGCTAAAGATTGTATTCTTTTCCATGACCAATCTGAACCTCTTGTACCACAT GATAATTATGATACTAATCATAATGGTAGGTTAAAAATTGTCAAATTTTGGTTTCAAAGACATCCTATTTGGTGGTTATT GTTAACTGTAATTCTGATAAGTTTTTTACTATCTTTTTGA
Upstream 100 bases:
>100_bases TACCCACTTTGTTGAGACGTAGGACATCTCGCCTAGTTAAATTAAACTTCAAATCAAAGTAGTAATTAAACTTATAAATC TATAATTTGAGATAATCAAA
Downstream 100 bases:
>100_bases CTATTCCCTGGACTAAATTCATGGGAATTAGTTTGAGAATATTTTTATCCACAACACCCACTGGACTGACACATCTAACA AAAGTGTAATAAGGTTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLNCPRCHQAVDSQAIACPYCQFPLKAFGHPGIPLYQAKPEEYLCNKCFYHIDDSCNFPQRPYAKDCILFHDQSEPLVPH DNYDTNHNGRLKIVKFWFQRHPIWWLLLTVILISFLLSF
Sequences:
>Translated_119_residues MLNCPRCHQAVDSQAIACPYCQFPLKAFGHPGIPLYQAKPEEYLCNKCFYHIDDSCNFPQRPYAKDCILFHDQSEPLVPH DNYDTNHNGRLKIVKFWFQRHPIWWLLLTVILISFLLSF >Mature_119_residues MLNCPRCHQAVDSQAIACPYCQFPLKAFGHPGIPLYQAKPEEYLCNKCFYHIDDSCNFPQRPYAKDCILFHDQSEPLVPH DNYDTNHNGRLKIVKFWFQRHPIWWLLLTVILISFLLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14041; Mature: 14041
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNCPRCHQAVDSQAIACPYCQFPLKAFGHPGIPLYQAKPEEYLCNKCFYHIDDSCNFPQ CCCCCHHHHHHCCCCEECCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCC RPYAKDCILFHDQSEPLVPHDNYDTNHNGRLKIVKFWFQRHPIWWLLLTVILISFLLSF CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNCPRCHQAVDSQAIACPYCQFPLKAFGHPGIPLYQAKPEEYLCNKCFYHIDDSCNFPQ CCCCCHHHHHHCCCCEECCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCC RPYAKDCILFHDQSEPLVPHDNYDTNHNGRLKIVKFWFQRHPIWWLLLTVILISFLLSF CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA