Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475163

Identifier: 113475163

GI number: 113475163

Start: 2209909

End: 2212056

Strand: Reverse

Name: 113475163

Synonym: Tery_1461

Alternate gene names: NA

Gene position: 2212056-2209909 (Counterclockwise)

Preceding gene: 113475165

Following gene: 113475161

Centisome position: 28.54

GC content: 31.47

Gene sequence:

>2148_bases
ATGGATATTGAACGTGAGATAAACTCATTTTTTTCTGATTTATTCGGCACAAAAGCTGATAGTAAAAGTGATTTATTTTC
ACTTTCAAATCATAAGATTAATTATTTCGATTCTACTTCAGATATTACCATAAAAAATTCAACTTTAGAGGATAATATAA
ACTCTACTGAATATTCGCTTGGTTCTTATAATTTCCTAGGAAATGAATTAGAATCTATCTCTATTAGAGATTCTGCAAGT
GTTGAAAATACAGAAGAAATTGATAAAATTACAGGTGATAATTTTGATACAAATATTCAGTTAAGAGCTGGTCAAAAGTC
AGATAATAAGATTGATACTGCAACTGAAATAGATATAGTTTCTGGTGAGAAAGTTAAGATAAACGATAGAATTGGCTACA
AAGAAAAGGGCAAGGTTGATAAATATGACTACTATAGTTTCGGCATATCTGAAAATATGGAAGTAAGTATTGATATGGAT
AAACTCCAGAAAAATGCTAATCTTCACTTATTTGATGAAAGTGGTAAAAAAGTATTGGCAAAGTCGAATAAAAGAGGTAA
AAAATCAGAAAATATTACTGAATATTTAGATGCAGGAGATTATTATCTGCGGGTATCTGCTGTGGGAAATGCAAAAACTC
CTTATCGCTTGATTTTAGAAAAAGTTCCTGATGATAAAAATATAGATGGAGCGAATGATTTAGGAAAATTATCTCAGAAA
GAACTGAAACTTAATGATAAAATTGGCTACAAAAAAAAGGGCAAGGTTGATAAATATGACTACTATAGTTTCGGCATATC
TGAAGATATGAAAGTAAATATTGAGATGGATAAACTCCAGAAAAATGCTAATCTTCACTTATTTGATGAAAGTGGTAAAA
AAGTATTGGCAAAGTCGAATAAAAGAGGTAAAAAATCAGAAAATATTACTGAATATTTAGATGCAGGAGATTATTATCTG
CGGGTATCTGCTGTGGGAAATGCAAAAACTCCTTATCGCTTGATTTTAGAAAACGTTCCTGATGATAAAAGTATAGATGG
AGCGAATAATTTAGGAAAATTATCTCAGAAAGAACTGAAAGTTAATGATAAAATTGGCTACAGAGAAAATGGTAAACGAG
ATGGAATAGATTTGTATTTTTTTGAGATTAACGAAGAACAAGAAGTAGATATTAATCTGAATAAACTGAAGCAAAACTCT
AATCTAAGATTAATTGATGAAGACGGTGAAACAGTTTTGGATAAATCGACTAACAAGGGTAAAAATTCAGAAAAAATTAC
AGAAGTTTTAGAACCAGGAATTTATTATGTAGAAGTTTATGCTCAAGGTAATGCTAAAACAAATTATGAACTTAGTTTGA
GTTCTCAGGAGGTTAATACAGTTTTTCCATCGGTATTAGAAACTTATGAATCAGGTACACGAGTAGGGTTTGAAAACCGA
GTTTCTTTGGAAATACCTGAAGGATGGGTTGGTAAACAAAAATCAATGTTTGAAACAATATTTGAAGGAAGATCGTTTGT
TGATGGTCAGTATTTTCCATTTACACTAACCTCTACAAAGTATCCAGATGTCTATGTAGAATTAAGCGTCAGATCGAATT
ATTTGACAGGGCTTATACAGAACTTGGCTAATACCTGGGCAATTGACGAAACCACCTATGAACCACAAGGAAAAGCAAAG
GTAAAAGGTAATCAAATTACTAATACTTATACTGCCAAAAATTCAATATCTCAAGAAAAGTATTATGTGGTTAGTACTGT
AGGGCCTAATGATGAAATTGCTACTGTGACAGTGGGTGGTTCTGTTAATAAACTAAAAGACTATAAAGATATCGCAAATG
ATGTAGTTGAAAGTCTAGATTTTCCTGAACCTACTGACTGGGAAGAATTCTTTAGTGATCATTGGTTAGCTTACGCTCCG
TATGGGAGCATATATGAAGGAATTTTCCTGGACGATGATCGTTCATTTTATCACATTTATGATTATTCAACGAATCGTTT
TGGTACTTGGGATATTACTCAAAAAGATGAGCTAGTATTAAGATATGAAAATGGTGAAGAAAAGGTTGGGCAACTTGATG
GTCCTAGTGTATCTAATAATATTATTTACGGTGAATTTGTTTATCAGGCGATAGAGAAAAATAGCTGA

Upstream 100 bases:

>100_bases
AAAAAACTGAACAAATAATTAAAATTAACCCGAGAAAAACATAATCATGATAACTTCGATGTAAAATCAATTATTTATAT
AATTTTGGAGGGCAAAGACA

Downstream 100 bases:

>100_bases
TAGTTAGTGTTTTTGAGTAAGCCCTATTTAGACAAAACTTCCGCATTTTTTAGTTCTAAATACTATATATCTATAAAGTA
AAAGTTGTTAGTCAACTATT

Product: peptidase-like protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; Peptidase

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MDIEREINSFFSDLFGTKADSKSDLFSLSNHKINYFDSTSDITIKNSTLEDNINSTEYSLGSYNFLGNELESISIRDSAS
VENTEEIDKITGDNFDTNIQLRAGQKSDNKIDTATEIDIVSGEKVKINDRIGYKEKGKVDKYDYYSFGISENMEVSIDMD
KLQKNANLHLFDESGKKVLAKSNKRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILEKVPDDKNIDGANDLGKLSQK
ELKLNDKIGYKKKGKVDKYDYYSFGISEDMKVNIEMDKLQKNANLHLFDESGKKVLAKSNKRGKKSENITEYLDAGDYYL
RVSAVGNAKTPYRLILENVPDDKSIDGANNLGKLSQKELKVNDKIGYRENGKRDGIDLYFFEINEEQEVDINLNKLKQNS
NLRLIDEDGETVLDKSTNKGKNSEKITEVLEPGIYYVEVYAQGNAKTNYELSLSSQEVNTVFPSVLETYESGTRVGFENR
VSLEIPEGWVGKQKSMFETIFEGRSFVDGQYFPFTLTSTKYPDVYVELSVRSNYLTGLIQNLANTWAIDETTYEPQGKAK
VKGNQITNTYTAKNSISQEKYYVVSTVGPNDEIATVTVGGSVNKLKDYKDIANDVVESLDFPEPTDWEEFFSDHWLAYAP
YGSIYEGIFLDDDRSFYHIYDYSTNRFGTWDITQKDELVLRYENGEEKVGQLDGPSVSNNIIYGEFVYQAIEKNS

Sequences:

>Translated_715_residues
MDIEREINSFFSDLFGTKADSKSDLFSLSNHKINYFDSTSDITIKNSTLEDNINSTEYSLGSYNFLGNELESISIRDSAS
VENTEEIDKITGDNFDTNIQLRAGQKSDNKIDTATEIDIVSGEKVKINDRIGYKEKGKVDKYDYYSFGISENMEVSIDMD
KLQKNANLHLFDESGKKVLAKSNKRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILEKVPDDKNIDGANDLGKLSQK
ELKLNDKIGYKKKGKVDKYDYYSFGISEDMKVNIEMDKLQKNANLHLFDESGKKVLAKSNKRGKKSENITEYLDAGDYYL
RVSAVGNAKTPYRLILENVPDDKSIDGANNLGKLSQKELKVNDKIGYRENGKRDGIDLYFFEINEEQEVDINLNKLKQNS
NLRLIDEDGETVLDKSTNKGKNSEKITEVLEPGIYYVEVYAQGNAKTNYELSLSSQEVNTVFPSVLETYESGTRVGFENR
VSLEIPEGWVGKQKSMFETIFEGRSFVDGQYFPFTLTSTKYPDVYVELSVRSNYLTGLIQNLANTWAIDETTYEPQGKAK
VKGNQITNTYTAKNSISQEKYYVVSTVGPNDEIATVTVGGSVNKLKDYKDIANDVVESLDFPEPTDWEEFFSDHWLAYAP
YGSIYEGIFLDDDRSFYHIYDYSTNRFGTWDITQKDELVLRYENGEEKVGQLDGPSVSNNIIYGEFVYQAIEKNS
>Mature_715_residues
MDIEREINSFFSDLFGTKADSKSDLFSLSNHKINYFDSTSDITIKNSTLEDNINSTEYSLGSYNFLGNELESISIRDSAS
VENTEEIDKITGDNFDTNIQLRAGQKSDNKIDTATEIDIVSGEKVKINDRIGYKEKGKVDKYDYYSFGISENMEVSIDMD
KLQKNANLHLFDESGKKVLAKSNKRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILEKVPDDKNIDGANDLGKLSQK
ELKLNDKIGYKKKGKVDKYDYYSFGISEDMKVNIEMDKLQKNANLHLFDESGKKVLAKSNKRGKKSENITEYLDAGDYYL
RVSAVGNAKTPYRLILENVPDDKSIDGANNLGKLSQKELKVNDKIGYRENGKRDGIDLYFFEINEEQEVDINLNKLKQNS
NLRLIDEDGETVLDKSTNKGKNSEKITEVLEPGIYYVEVYAQGNAKTNYELSLSSQEVNTVFPSVLETYESGTRVGFENR
VSLEIPEGWVGKQKSMFETIFEGRSFVDGQYFPFTLTSTKYPDVYVELSVRSNYLTGLIQNLANTWAIDETTYEPQGKAK
VKGNQITNTYTAKNSISQEKYYVVSTVGPNDEIATVTVGGSVNKLKDYKDIANDVVESLDFPEPTDWEEFFSDHWLAYAP
YGSIYEGIFLDDDRSFYHIYDYSTNRFGTWDITQKDELVLRYENGEEKVGQLDGPSVSNNIIYGEFVYQAIEKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81164; Mature: 81164

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIEREINSFFSDLFGTKADSKSDLFSLSNHKINYFDSTSDITIKNSTLEDNINSTEYSL
CCHHHHHHHHHHHHHCCCCCCCHHHEECCCCEEEEECCCCCEEEECCCCCCCCCCCEEEC
GSYNFLGNELESISIRDSASVENTEEIDKITGDNFDTNIQLRAGQKSDNKIDTATEIDIV
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEE
SGEKVKINDRIGYKEKGKVDKYDYYSFGISENMEVSIDMDKLQKNANLHLFDESGKKVLA
CCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEECCCCCEEEC
KSNKRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILEKVPDDKNIDGANDLGKLSQK
CCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH
ELKLNDKIGYKKKGKVDKYDYYSFGISEDMKVNIEMDKLQKNANLHLFDESGKKVLAKSN
HEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEECCCCCEEECCCC
KRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILENVPDDKSIDGANNLGKLSQKELK
CCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEE
VNDKIGYRENGKRDGIDLYFFEINEEQEVDINLNKLKQNSNLRLIDEDGETVLDKSTNKG
ECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEHHHHCCCCCEEEECCCCCEEECCCCCCC
KNSEKITEVLEPGIYYVEVYAQGNAKTNYELSLSSQEVNTVFPSVLETYESGTRVGFENR
CCHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCE
VSLEIPEGWVGKQKSMFETIFEGRSFVDGQYFPFTLTSTKYPDVYVELSVRSNYLTGLIQ
EEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHH
NLANTWAIDETTYEPQGKAKVKGNQITNTYTAKNSISQEKYYVVSTVGPNDEIATVTVGG
HHHHCEECCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECC
SVNKLKDYKDIANDVVESLDFPEPTDWEEFFSDHWLAYAPYGSIYEGIFLDDDRSFYHIY
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCCCCCCCEEEECCCCEEEEE
DYSTNRFGTWDITQKDELVLRYENGEEKVGQLDGPSVSNNIIYGEFVYQAIEKNS
ECCCCCEEEEECCCCCCEEEEECCCCHHCCCCCCCCCCCCEEEHHHHHHHHHCCC
>Mature Secondary Structure
MDIEREINSFFSDLFGTKADSKSDLFSLSNHKINYFDSTSDITIKNSTLEDNINSTEYSL
CCHHHHHHHHHHHHHCCCCCCCHHHEECCCCEEEEECCCCCEEEECCCCCCCCCCCEEEC
GSYNFLGNELESISIRDSASVENTEEIDKITGDNFDTNIQLRAGQKSDNKIDTATEIDIV
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEE
SGEKVKINDRIGYKEKGKVDKYDYYSFGISENMEVSIDMDKLQKNANLHLFDESGKKVLA
CCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEECCCCCEEEC
KSNKRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILEKVPDDKNIDGANDLGKLSQK
CCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH
ELKLNDKIGYKKKGKVDKYDYYSFGISEDMKVNIEMDKLQKNANLHLFDESGKKVLAKSN
HEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEECCCCCEEECCCC
KRGKKSENITEYLDAGDYYLRVSAVGNAKTPYRLILENVPDDKSIDGANNLGKLSQKELK
CCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEE
VNDKIGYRENGKRDGIDLYFFEINEEQEVDINLNKLKQNSNLRLIDEDGETVLDKSTNKG
ECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEHHHHCCCCCEEEECCCCCEEECCCCCCC
KNSEKITEVLEPGIYYVEVYAQGNAKTNYELSLSSQEVNTVFPSVLETYESGTRVGFENR
CCHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCE
VSLEIPEGWVGKQKSMFETIFEGRSFVDGQYFPFTLTSTKYPDVYVELSVRSNYLTGLIQ
EEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHH
NLANTWAIDETTYEPQGKAKVKGNQITNTYTAKNSISQEKYYVVSTVGPNDEIATVTVGG
HHHHCEECCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECC
SVNKLKDYKDIANDVVESLDFPEPTDWEEFFSDHWLAYAPYGSIYEGIFLDDDRSFYHIY
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCCCCCCCEEEECCCCEEEEE
DYSTNRFGTWDITQKDELVLRYENGEEKVGQLDGPSVSNNIIYGEFVYQAIEKNS
ECCCCCEEEEECCCCCCEEEEECCCCHHCCCCCCCCCCCCEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA