Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yegM [C]

Identifier: 113475147

GI number: 113475147

Start: 2179545

End: 2181449

Strand: Reverse

Name: yegM [C]

Synonym: Tery_1441

Alternate gene names: 113475147

Gene position: 2181449-2179545 (Counterclockwise)

Preceding gene: 113475149

Following gene: 113475146

Centisome position: 28.15

GC content: 41.84

Gene sequence:

>1905_bases
ATGCTAACTCATAATTCATCAAATTCAGCTGTTCAAGAAAAACTTAGATCCATAGAAAATTTACAAGAAAATACTAAAAC
AGAATTATATCAAGAGGAAAAAAATACGATTCCTCAATGGTATCGATCTGACAAAAAGAATTTTTCTGTTCTACTTTTGG
CAACAATAATTACTACAACTCTCGGAGTAGGATTCGTGGGAGGACAATGGTGGCAATCTCATAGCAATAAAACACCAAAC
GAAACATCAGCAGTACCGCCAAGTAGACGAAGAAGTACTCTGGTTAAAGTAATGCCAATAAAAACTATCTCCCTCCAAGA
AACTTCAGAATTTGTGGGAACGATGGAGGCAACGCGGTCTATTAAAATTAAGCCAGAAATAGATGGTAGGGTGGTAGAAA
TTTTAGTAAAGGAAGGAACTTTTGTCTCTGAAGGGCAGGCGATCGCTAAACTCAAAAGTGATAATGTGGAAGCCAACTTA
AAGAGAGCCAAAGCTAACCTCCAACAAAGTGAAGCACGTTTAGCACAACTGAGAATAGGAGCAAGACCAGAAAAAATTGC
AGCAGCTAGAGCCCGTCTCCAACAATCTCAGGCTAGGTTGGCTGAAATGAAAAGAGGCACGCGACCAGAAAAAATTGCAG
CAGCCAGAGCCCGTCTCCAGCAATCTCAGGCTAGGTTAGCTGAACTGCGGGCGGGTACTCGTGATGAAGAGATTGCTCAA
GCAAAAGCAGAATTACAAGAGGCAAAAGTACGATTAGAAAATGCTAGATCCGGTGGTCTTTTAGAAGAAATTGCCCAAGC
AAAAGCGCAAATAAAAGTACAACAGGCAGAATTAGAATTAGCTAGTGAACAAGTCAAGCGAAACCAAAACTTAAGAGCAG
AAGGAGCGATCGCTGAGTTAACTTTTCAGGAAATTTTTCAAGAAGAGAAAGCAGCTCAGGCAAGGGTAGAAGAAGCAAAA
AGACGAGTGACGCAATTGCAAAGAAATAGAGAATCTACAATTCAAACATTAGAAGCAGCGGTAGAACAACAACGCCAGAT
ATTGAGAAGGCTAAAAAATGGTACTCGCCCTGAAGAAATTACTAGGGTAGAGGCGGAGGTAGGGGAGGCTCGCAATAATT
TAGAGGAGTTGCAAAATGGCACTCGCCTTGAAGAAATTGCTAGGGCAGAGGCGGAGGTAGCGGAGGCTCGTAGTAATTTA
GAAGAGTTGCAAAATGGCACTCGCCCTGAAGAAATTGCTGAGGGCTTGGCAGAGGTAGCAGCAGCATTAGCAGAGGTAGA
TAGTTGGCAGGCTGAGTTTGAGGAGACAGTAGTTGTAGCTCCTTTTGCAGGTGTGATTGGAGATATGATTGTGAAGATTG
GGGATTTTGTTAATGATGGTGACATTATGACTACTGTGACGGCAAATCAGGTATTGAGTGTAAATTTACTAATTCCGTTA
GAGCGACTAGGAGATTTGTGGTTGGGTTTACCTGTGGAGGTTAGGAGTCCTGAAGGTAAGGTTTTGGGAATGGGTAAGGT
TAGTTTTATTTCTCCTACTGTTAGTGATTCTCAAACTGTTTTGGTTAAGGTAGATGTGGATAATAGTTCTGGAAAGTTAC
AAGACGGTCAGTTTGTGCAAACTAATGTGATTTGGGAGCAGCGTCAAGCTGTAGTTGTGCCGATGACAGCAGTGGGTTTT
GAAGGGGAAACACGGTTTGTGTATTTGTTGGAGGGAGAAGGTGAAGAGCAAAAGGCAAGGCGTCAAATAATTGAGTTGGG
TTTGGTTAAGGGTGATATGACTGAGGTAATGTCTGGTTTAGAGCCTGGGGATAATTTGATTGTTTCGGGTTTACAGAAGT
TGAATGATGGAGCTACTGTGAAGATTTTGAATTCAGGGAAAAGAGATGGGAAGTCAAAATTATAG

Upstream 100 bases:

>100_bases
AAATGATAAATTTTCATCTAAGAAAGTAGAAAAAAATGCATTTTTACTCTAATATTAATTGGCTAAATAATTATTAAAAA
AAATCAAAATAAAATAAAAA

Downstream 100 bases:

>100_bases
ATTTCATATTAAATTAGACTTATGCAAAATATTAAGATATCAAGTTATATAGTGTTTGTAGGACTTGAAAGAGCTAGATA
GTGGTAAAACGCTTTCTTTT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane-Fusion Protein; RND Efflux Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; RND Family Efflux Transporter Subunit MFP; HAE1 Family Efflux Transporter MFP Subunit; Periplasmic Component Of Efflux System; Membrane Fusion Protein; HlyD-Like Secretion Protein; Secretion Protein; RND Family Efflux Transporter; Multidrug Efflux Transporter; Efflux Transporter RND Family MFP Subunit Subfamily; Secretion Protein Hlyd; Multidrug RND Transporter Membrane Fusion Protein; Acriflavine Resistance Protein E; Efflux Transporter Hae1 Family; HlyD Family Protein Secretion Protein; Cation/Multidrug Efflux System Mebrane-Fusion Component; Secretion Protein HlyD Family Protein; RND Efflux Membrane-Fusion Protein; HlyD-Family Secretion Protein; HlyD Family-Like Protein; Cation Efflux System; Hlyd-Like Secretion Protein; Multidrug Efflux System Inner Membrane Protein; Secretion Protein HlyD-Like Protein; Multidrug Efflux System Subunit A; Secretion Protein HlyD Family; Secretion Protein Family Hlyd; RND Efflux Transporter; Periplasmic Multidrug Efflux Lipoprotein; Efflux Transporter Rnd Family Mfp Subunit; Efflux System

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MLTHNSSNSAVQEKLRSIENLQENTKTELYQEEKNTIPQWYRSDKKNFSVLLLATIITTTLGVGFVGGQWWQSHSNKTPN
ETSAVPPSRRRSTLVKVMPIKTISLQETSEFVGTMEATRSIKIKPEIDGRVVEILVKEGTFVSEGQAIAKLKSDNVEANL
KRAKANLQQSEARLAQLRIGARPEKIAAARARLQQSQARLAEMKRGTRPEKIAAARARLQQSQARLAELRAGTRDEEIAQ
AKAELQEAKVRLENARSGGLLEEIAQAKAQIKVQQAELELASEQVKRNQNLRAEGAIAELTFQEIFQEEKAAQARVEEAK
RRVTQLQRNRESTIQTLEAAVEQQRQILRRLKNGTRPEEITRVEAEVGEARNNLEELQNGTRLEEIARAEAEVAEARSNL
EELQNGTRPEEIAEGLAEVAAALAEVDSWQAEFEETVVVAPFAGVIGDMIVKIGDFVNDGDIMTTVTANQVLSVNLLIPL
ERLGDLWLGLPVEVRSPEGKVLGMGKVSFISPTVSDSQTVLVKVDVDNSSGKLQDGQFVQTNVIWEQRQAVVVPMTAVGF
EGETRFVYLLEGEGEEQKARRQIIELGLVKGDMTEVMSGLEPGDNLIVSGLQKLNDGATVKILNSGKRDGKSKL

Sequences:

>Translated_634_residues
MLTHNSSNSAVQEKLRSIENLQENTKTELYQEEKNTIPQWYRSDKKNFSVLLLATIITTTLGVGFVGGQWWQSHSNKTPN
ETSAVPPSRRRSTLVKVMPIKTISLQETSEFVGTMEATRSIKIKPEIDGRVVEILVKEGTFVSEGQAIAKLKSDNVEANL
KRAKANLQQSEARLAQLRIGARPEKIAAARARLQQSQARLAEMKRGTRPEKIAAARARLQQSQARLAELRAGTRDEEIAQ
AKAELQEAKVRLENARSGGLLEEIAQAKAQIKVQQAELELASEQVKRNQNLRAEGAIAELTFQEIFQEEKAAQARVEEAK
RRVTQLQRNRESTIQTLEAAVEQQRQILRRLKNGTRPEEITRVEAEVGEARNNLEELQNGTRLEEIARAEAEVAEARSNL
EELQNGTRPEEIAEGLAEVAAALAEVDSWQAEFEETVVVAPFAGVIGDMIVKIGDFVNDGDIMTTVTANQVLSVNLLIPL
ERLGDLWLGLPVEVRSPEGKVLGMGKVSFISPTVSDSQTVLVKVDVDNSSGKLQDGQFVQTNVIWEQRQAVVVPMTAVGF
EGETRFVYLLEGEGEEQKARRQIIELGLVKGDMTEVMSGLEPGDNLIVSGLQKLNDGATVKILNSGKRDGKSKL
>Mature_634_residues
MLTHNSSNSAVQEKLRSIENLQENTKTELYQEEKNTIPQWYRSDKKNFSVLLLATIITTTLGVGFVGGQWWQSHSNKTPN
ETSAVPPSRRRSTLVKVMPIKTISLQETSEFVGTMEATRSIKIKPEIDGRVVEILVKEGTFVSEGQAIAKLKSDNVEANL
KRAKANLQQSEARLAQLRIGARPEKIAAARARLQQSQARLAEMKRGTRPEKIAAARARLQQSQARLAELRAGTRDEEIAQ
AKAELQEAKVRLENARSGGLLEEIAQAKAQIKVQQAELELASEQVKRNQNLRAEGAIAELTFQEIFQEEKAAQARVEEAK
RRVTQLQRNRESTIQTLEAAVEQQRQILRRLKNGTRPEEITRVEAEVGEARNNLEELQNGTRLEEIARAEAEVAEARSNL
EELQNGTRPEEIAEGLAEVAAALAEVDSWQAEFEETVVVAPFAGVIGDMIVKIGDFVNDGDIMTTVTANQVLSVNLLIPL
ERLGDLWLGLPVEVRSPEGKVLGMGKVSFISPTVSDSQTVLVKVDVDNSSGKLQDGQFVQTNVIWEQRQAVVVPMTAVGF
EGETRFVYLLEGEGEEQKARRQIIELGLVKGDMTEVMSGLEPGDNLIVSGLQKLNDGATVKILNSGKRDGKSKL

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70083; Mature: 70083

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHNSSNSAVQEKLRSIENLQENTKTELYQEEKNTIPQWYRSDKKNFSVLLLATIITTT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
LGVGFVGGQWWQSHSNKTPNETSAVPPSRRRSTLVKVMPIKTISLQETSEFVGTMEATRS
HHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCEEEEEEEEEECHHHHHHHHHHHHHCCE
IKIKPEIDGRVVEILVKEGTFVSEGQAIAKLKSDNVEANLKRAKANLQQSEARLAQLRIG
EEECCCCCCCEEEEEECCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ARPEKIAAARARLQQSQARLAEMKRGTRPEKIAAARARLQQSQARLAELRAGTRDEEIAQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AKAELQEAKVRLENARSGGLLEEIAQAKAQIKVQQAELELASEQVKRNQNLRAEGAIAEL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
TFQEIFQEEKAAQARVEEAKRRVTQLQRNRESTIQTLEAAVEQQRQILRRLKNGTRPEEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TRVEAEVGEARNNLEELQNGTRLEEIARAEAEVAEARSNLEELQNGTRPEEIAEGLAEVA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AALAEVDSWQAEFEETVVVAPFAGVIGDMIVKIGDFVNDGDIMTTVTANQVLSVNLLIPL
HHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEH
ERLGDLWLGLPVEVRSPEGKVLGMGKVSFISPTVSDSQTVLVKVDVDNSSGKLQDGQFVQ
HHHCHHHCCCCEEEECCCCCEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEE
TNVIWEQRQAVVVPMTAVGFEGETRFVYLLEGEGEEQKARRQIIELGLVKGDMTEVMSGL
EHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCC
EPGDNLIVSGLQKLNDGATVKILNSGKRDGKSKL
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLTHNSSNSAVQEKLRSIENLQENTKTELYQEEKNTIPQWYRSDKKNFSVLLLATIITTT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
LGVGFVGGQWWQSHSNKTPNETSAVPPSRRRSTLVKVMPIKTISLQETSEFVGTMEATRS
HHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCEEEEEEEEEECHHHHHHHHHHHHHCCE
IKIKPEIDGRVVEILVKEGTFVSEGQAIAKLKSDNVEANLKRAKANLQQSEARLAQLRIG
EEECCCCCCCEEEEEECCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ARPEKIAAARARLQQSQARLAEMKRGTRPEKIAAARARLQQSQARLAELRAGTRDEEIAQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AKAELQEAKVRLENARSGGLLEEIAQAKAQIKVQQAELELASEQVKRNQNLRAEGAIAEL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
TFQEIFQEEKAAQARVEEAKRRVTQLQRNRESTIQTLEAAVEQQRQILRRLKNGTRPEEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TRVEAEVGEARNNLEELQNGTRLEEIARAEAEVAEARSNLEELQNGTRPEEIAEGLAEVA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AALAEVDSWQAEFEETVVVAPFAGVIGDMIVKIGDFVNDGDIMTTVTANQVLSVNLLIPL
HHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEH
ERLGDLWLGLPVEVRSPEGKVLGMGKVSFISPTVSDSQTVLVKVDVDNSSGKLQDGQFVQ
HHHCHHHCCCCEEEECCCCCEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEE
TNVIWEQRQAVVVPMTAVGFEGETRFVYLLEGEGEEQKARRQIIELGLVKGDMTEVMSGL
EHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCC
EPGDNLIVSGLQKLNDGATVKILNSGKRDGKSKL
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA