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The map label for this gene is ynbB [H]

Identifier: 113475145

GI number: 113475145

Start: 2174746

End: 2175996

Strand: Direct

Name: ynbB [H]

Synonym: Tery_1438

Alternate gene names: 113475145

Gene position: 2174746-2175996 (Clockwise)

Preceding gene: 113475143

Following gene: 113475148

Centisome position: 28.06

GC content: 43.09

Gene sequence:

>1251_bases
ATGAATAGTATTGAATATCTACAAGCTGGAGAACAAGAGCTATATCCCATATTTTCGGAAATTGATAGCTTGGTTAAGCA
AAATCTCAGGGGGGTAATAGATGCTTTTCGTCATCATCGAGTAGGTGTCCATCATTTTTCTGGAGTTACTGGTTATGGCC
ATGACGATATTGGCCGGGAGACTTTGGACAAGGTTTTTGCAGAGATTATGGGGGCTGAGGCAGCAGCAGTAAGAATCCAA
TTTGTTTCTGGAACTCATGCGATCGCCTGTGCTTTATTTGGGACTCTAAGGCCAGGGGATGAAATGTTGTCTGTTGTGGG
CCCTCCTTATGATACTTTAGAGGAAGTAATTGGTCTCAGAGAAGAAGGCCAAGGTTCTCTGAAAGAATTTGGTATTAGTT
ACCGAGAATTACCCCTGACCGAAACTGGGACAATAAATTGGCAAGGGTTAGAATCTGCTGTTACTGAAAAAACTCGTCTG
GCTTTAATTCAACGTTCTTGTGGTTATTCTTGGCGAGCTAGTTTAGCTATTTCAGAGATTGAGAAAATTGTCAAGATAGT
TAAGCAAAAAAATTCTGAAACGGTTTGTTTTGTAGACAACTGTTATGGAGAGTTTATTGAAGACCGGGAACCGATCGCAG
TGGGAGCAGATTTAGTAGCGGGGTCTTTAATTAAAAATCCTGGTGGCACAATTGTTATGGCGGGGGGCTATGTAGCAGGT
AGAGCAGATTTGGTGGAAGCTGCAACTTGTCGGTTAACTGCTCCTGGTATTGGTAGTAGTGGGGGAGCAACTTTTGAGCA
AAATAGATTATTGTTTCAAGGTTTATTTTTGGCACCACAAATGGTGGGGGAAGCGATGAAGGGAAATCATTTGACGGCTT
ATGTTTTTGATAAGTTGGGTTATGCTGTTAATCCTCTTCCTTTTGAAAAACGACGGGATGTTATTCAGGGGATTAAGTTG
GGTTCCCCGGAAAAGTTAATTGCCTTTTGTCGAGCTATTCAGCAATATTCCCCTGTAGGGTCTTATTTAGATCCGGTACC
GGGGCCGATGCCTGGATATGACAGTCAGTTGGTTATGGCAGGTGGAACTTTTATTGATGGGTCTACTTCTGAATTTTCGG
CAGATGGACCTTTGAGGGAACCTTATGTGGTTTTTTGTCAGGGGGGGACTCATTGGACTCATGTTGCGATCGCTCTGGAG
GCGGCTATTAAGGCAGTAGGGAGTAGTAGAGATATTCTGCAACATCCCTAA

Upstream 100 bases:

>100_bases
AGAAACTTAGATTTTATTAATAGCAATATTAATAAGATAGATTTTATTTTTTTTTTTATTATATCACAAATAAAACAAAA
ACAAATTTAAAAAAATAAAT

Downstream 100 bases:

>100_bases
TTTTTAGGAACAGGAGCCAACAATTTTTGGGGTAATCATAATTCATCATAATGCATCATGAAACGCGCAAATATCTTAAT
TTATAGTTTAATTCACGAAC

Product: aluminium resistance

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MNSIEYLQAGEQELYPIFSEIDSLVKQNLRGVIDAFRHHRVGVHHFSGVTGYGHDDIGRETLDKVFAEIMGAEAAAVRIQ
FVSGTHAIACALFGTLRPGDEMLSVVGPPYDTLEEVIGLREEGQGSLKEFGISYRELPLTETGTINWQGLESAVTEKTRL
ALIQRSCGYSWRASLAISEIEKIVKIVKQKNSETVCFVDNCYGEFIEDREPIAVGADLVAGSLIKNPGGTIVMAGGYVAG
RADLVEAATCRLTAPGIGSSGGATFEQNRLLFQGLFLAPQMVGEAMKGNHLTAYVFDKLGYAVNPLPFEKRRDVIQGIKL
GSPEKLIAFCRAIQQYSPVGSYLDPVPGPMPGYDSQLVMAGGTFIDGSTSEFSADGPLREPYVVFCQGGTHWTHVAIALE
AAIKAVGSSRDILQHP

Sequences:

>Translated_416_residues
MNSIEYLQAGEQELYPIFSEIDSLVKQNLRGVIDAFRHHRVGVHHFSGVTGYGHDDIGRETLDKVFAEIMGAEAAAVRIQ
FVSGTHAIACALFGTLRPGDEMLSVVGPPYDTLEEVIGLREEGQGSLKEFGISYRELPLTETGTINWQGLESAVTEKTRL
ALIQRSCGYSWRASLAISEIEKIVKIVKQKNSETVCFVDNCYGEFIEDREPIAVGADLVAGSLIKNPGGTIVMAGGYVAG
RADLVEAATCRLTAPGIGSSGGATFEQNRLLFQGLFLAPQMVGEAMKGNHLTAYVFDKLGYAVNPLPFEKRRDVIQGIKL
GSPEKLIAFCRAIQQYSPVGSYLDPVPGPMPGYDSQLVMAGGTFIDGSTSEFSADGPLREPYVVFCQGGTHWTHVAIALE
AAIKAVGSSRDILQHP
>Mature_416_residues
MNSIEYLQAGEQELYPIFSEIDSLVKQNLRGVIDAFRHHRVGVHHFSGVTGYGHDDIGRETLDKVFAEIMGAEAAAVRIQ
FVSGTHAIACALFGTLRPGDEMLSVVGPPYDTLEEVIGLREEGQGSLKEFGISYRELPLTETGTINWQGLESAVTEKTRL
ALIQRSCGYSWRASLAISEIEKIVKIVKQKNSETVCFVDNCYGEFIEDREPIAVGADLVAGSLIKNPGGTIVMAGGYVAG
RADLVEAATCRLTAPGIGSSGGATFEQNRLLFQGLFLAPQMVGEAMKGNHLTAYVFDKLGYAVNPLPFEKRRDVIQGIKL
GSPEKLIAFCRAIQQYSPVGSYLDPVPGPMPGYDSQLVMAGGTFIDGSTSEFSADGPLREPYVVFCQGGTHWTHVAIALE
AAIKAVGSSRDILQHP

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 44934; Mature: 44934

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIEYLQAGEQELYPIFSEIDSLVKQNLRGVIDAFRHHRVGVHHFSGVTGYGHDDIGRE
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHH
TLDKVFAEIMGAEAAAVRIQFVSGTHAIACALFGTLRPGDEMLSVVGPPYDTLEEVIGLR
HHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCC
EEGQGSLKEFGISYRELPLTETGTINWQGLESAVTEKTRLALIQRSCGYSWRASLAISEI
CCCCCCHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EKIVKIVKQKNSETVCFVDNCYGEFIEDREPIAVGADLVAGSLIKNPGGTIVMAGGYVAG
HHHHHHHHCCCCCEEEEEECHHHHHHCCCCCEEECHHHHHHHHHCCCCCCEEEECCEEEC
RADLVEAATCRLTAPGIGSSGGATFEQNRLLFQGLFLAPQMVGEAMKGNHLTAYVFDKLG
CHHHHHHHHEEEECCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCC
YAVNPLPFEKRRDVIQGIKLGSPEKLIAFCRAIQQYSPVGSYLDPVPGPMPGYDSQLVMA
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE
GGTFIDGSTSEFSADGPLREPYVVFCQGGTHWTHVAIALEAAIKAVGSSRDILQHP
CCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MNSIEYLQAGEQELYPIFSEIDSLVKQNLRGVIDAFRHHRVGVHHFSGVTGYGHDDIGRE
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHH
TLDKVFAEIMGAEAAAVRIQFVSGTHAIACALFGTLRPGDEMLSVVGPPYDTLEEVIGLR
HHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCC
EEGQGSLKEFGISYRELPLTETGTINWQGLESAVTEKTRLALIQRSCGYSWRASLAISEI
CCCCCCHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EKIVKIVKQKNSETVCFVDNCYGEFIEDREPIAVGADLVAGSLIKNPGGTIVMAGGYVAG
HHHHHHHHCCCCCEEEEEECHHHHHHCCCCCEEECHHHHHHHHHCCCCCCEEEECCEEEC
RADLVEAATCRLTAPGIGSSGGATFEQNRLLFQGLFLAPQMVGEAMKGNHLTAYVFDKLG
CHHHHHHHHEEEECCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCC
YAVNPLPFEKRRDVIQGIKLGSPEKLIAFCRAIQQYSPVGSYLDPVPGPMPGYDSQLVMA
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE
GGTFIDGSTSEFSADGPLREPYVVFCQGGTHWTHVAIALEAAIKAVGSSRDILQHP
CCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]