| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475127
Identifier: 113475127
GI number: 113475127
Start: 2149880
End: 2150767
Strand: Direct
Name: 113475127
Synonym: Tery_1419
Alternate gene names: NA
Gene position: 2149880-2150767 (Clockwise)
Preceding gene: 113475123
Following gene: 113475130
Centisome position: 27.74
GC content: 31.64
Gene sequence:
>888_bases ATGAAGTTACCAACTTTTTTAGTTGTAGGCATAGAGAAAGCAGGAACTACATCAATTTATCAATATTTAAACCAACATCC CCAAGTTTATATGAGTCCTGTCAAAGAAACAAACTTTTTGGAGAGAGATTGGGAAAATTTTCAAGGGAAACCAAATCCAA AAATAATTGATACTTGGGAAAAATACTGCAACCTTTTTAACGATGTTCAAGATGAAGTTGCTATTGGTGAAGTATCTCCT AATTATCTTTTTCATTATAAATTTTCATCCTTAAGGATTATTAAATACGTTCCTGATGTGAAAATGATAGCTATACTTAG AAATCCAGTAGATAGAGCTTATTCTGACTATTTAATGCACCTTCGTGATTCTATAAATATGGAAAAACTTCATTCTTTAA CTGAACAAGTTAGATTTCGTGCTGATACTTCTTTCACTCTTAAAAAAGGATTTTACTTTACTCCAGTTAAGCATTATTTT GATACTTTTGGGAAAGAAAGAGTGAAAATTTATCTGTATGATAACTTGTCTGAAAATTCTTTGGGAATGATGCAGGATAT GTATCAATTTATTGGAGTAAATAGTAACTTTATTCCAGACACCTCAAAACGTCAACAAGTTGCTGCAGTTCCTAAGAACC AATCTCTGAATAATTTAATCAAAACTAAAAATCCTGTCAGAGCAGCAGTTTCATCTATTTTAAGGGTGGTAATGCCTCGG GAAATGAGACAAAAATTACGCTCTAGCTTAATCAATTTCAATTCAGGAGGAAAAGAACTCAAACCTCTTTCTTCAGAAGA ACGTCAGCTATTAATTGATTTCTACCGTGAAGATATTCTTAAGCTACAAAATTTGATTCAAAGAGACCTTTCATCTTGGT TAATTTAG
Upstream 100 bases:
>100_bases AGTAGAATAGGGAACAATTAAAAAATATCTACCTACTAACCGTACCATATTAATAACCGAATATGTTATATCTTAATCAA TTAAATTTAGGAGAAACAAA
Downstream 100 bases:
>100_bases GGAGTAGGAGATTGGGAGAGTTGGGGAGTAGAAAAGTTGGACATTAAGGGACTTATAGCAACATGGGCTAGTATGTTTGC ACAATACAAATTACTACTGA
Product: sulfotransferase
Products: NA
Alternate protein names: Sulfotransferase Domain Superfamily; Sulfotransferase Protein; Deacetylase Sulfotransferase; Sulfotransferase Domain Protein; N-Deacetylase/N-Sulfotransferase; 3-Beta-Hydroxysteroid Sulfotransferase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKLPTFLVVGIEKAGTTSIYQYLNQHPQVYMSPVKETNFLERDWENFQGKPNPKIIDTWEKYCNLFNDVQDEVAIGEVSP NYLFHYKFSSLRIIKYVPDVKMIAILRNPVDRAYSDYLMHLRDSINMEKLHSLTEQVRFRADTSFTLKKGFYFTPVKHYF DTFGKERVKIYLYDNLSENSLGMMQDMYQFIGVNSNFIPDTSKRQQVAAVPKNQSLNNLIKTKNPVRAAVSSILRVVMPR EMRQKLRSSLINFNSGGKELKPLSSEERQLLIDFYREDILKLQNLIQRDLSSWLI
Sequences:
>Translated_295_residues MKLPTFLVVGIEKAGTTSIYQYLNQHPQVYMSPVKETNFLERDWENFQGKPNPKIIDTWEKYCNLFNDVQDEVAIGEVSP NYLFHYKFSSLRIIKYVPDVKMIAILRNPVDRAYSDYLMHLRDSINMEKLHSLTEQVRFRADTSFTLKKGFYFTPVKHYF DTFGKERVKIYLYDNLSENSLGMMQDMYQFIGVNSNFIPDTSKRQQVAAVPKNQSLNNLIKTKNPVRAAVSSILRVVMPR EMRQKLRSSLINFNSGGKELKPLSSEERQLLIDFYREDILKLQNLIQRDLSSWLI >Mature_295_residues MKLPTFLVVGIEKAGTTSIYQYLNQHPQVYMSPVKETNFLERDWENFQGKPNPKIIDTWEKYCNLFNDVQDEVAIGEVSP NYLFHYKFSSLRIIKYVPDVKMIAILRNPVDRAYSDYLMHLRDSINMEKLHSLTEQVRFRADTSFTLKKGFYFTPVKHYF DTFGKERVKIYLYDNLSENSLGMMQDMYQFIGVNSNFIPDTSKRQQVAAVPKNQSLNNLIKTKNPVRAAVSSILRVVMPR EMRQKLRSSLINFNSGGKELKPLSSEERQLLIDFYREDILKLQNLIQRDLSSWLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34621; Mature: 34621
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPTFLVVGIEKAGTTSIYQYLNQHPQVYMSPVKETNFLERDWENFQGKPNPKIIDTWE CCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHH KYCNLFNDVQDEVAIGEVSPNYLFHYKFSSLRIIKYVPDVKMIAILRNPVDRAYSDYLMH HHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEECCCCHHHHHHHHCHHHHHHHHHHHH LRDSINMEKLHSLTEQVRFRADTSFTLKKGFYFTPVKHYFDTFGKERVKIYLYDNLSENS HHHCCCHHHHHHHHHHHHHHCCCCEEEECCEEECHHHHHHHHCCCCEEEEEEECCCCCCC LGMMQDMYQFIGVNSNFIPDTSKRQQVAAVPKNQSLNNLIKTKNPVRAAVSSILRVVMPR HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCH EMRQKLRSSLINFNSGGKELKPLSSEERQLLIDFYREDILKLQNLIQRDLSSWLI HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLPTFLVVGIEKAGTTSIYQYLNQHPQVYMSPVKETNFLERDWENFQGKPNPKIIDTWE CCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHH KYCNLFNDVQDEVAIGEVSPNYLFHYKFSSLRIIKYVPDVKMIAILRNPVDRAYSDYLMH HHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEECCCCHHHHHHHHCHHHHHHHHHHHH LRDSINMEKLHSLTEQVRFRADTSFTLKKGFYFTPVKHYFDTFGKERVKIYLYDNLSENS HHHCCCHHHHHHHHHHHHHHCCCCEEEECCEEECHHHHHHHHCCCCEEEEEEECCCCCCC LGMMQDMYQFIGVNSNFIPDTSKRQQVAAVPKNQSLNNLIKTKNPVRAAVSSILRVVMPR HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCH EMRQKLRSSLINFNSGGKELKPLSSEERQLLIDFYREDILKLQNLIQRDLSSWLI HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA