Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475106

Identifier: 113475106

GI number: 113475106

Start: 2123603

End: 2123848

Strand: Reverse

Name: 113475106

Synonym: Tery_1390

Alternate gene names: NA

Gene position: 2123848-2123603 (Counterclockwise)

Preceding gene: 113475107

Following gene: 113475102

Centisome position: 27.4

GC content: 28.46

Gene sequence:

>246_bases
TTGAGTTGGCCATTGTTTTGGTTTCCTATTATCAAAATTATTAATCAAGAATTTTCTGATAGTAGTCAATTAATTTTTAC
CATAGATAGGACACAATGGAAAAATCATAATATTTTCGTTATTGCTGTCATATACAAGAAACGAGCATTAGCTATTTATT
GGCAAGTTTTTCACAAAAAAGGCTCTACTAATTTAGCCGAGCAAAAGGCACTTATTAAACCAGTTTTACGGTTATTAAAA
ATATAA

Upstream 100 bases:

>100_bases
AAAACTGTCAAAATAGAAAGGCTTGCAGGCTGTTTTCCTTTACCAATTAAATATGAAAGCCGTCGCCGTCACATTCAAAG
ATTTTTAACATCCTGCATCT

Downstream 100 bases:

>100_bases
ATTAGTAGTTATTGGAGACCGGAAATTTCACGGTTTAGAGTTATCTCACTGGCTAAAAGTTCAAGCTAGAAATCAAAAAA
TTAATTTTATCTTCAGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKKGSTNLAEQKALIKPVLRLLK
I

Sequences:

>Translated_81_residues
MSWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKKGSTNLAEQKALIKPVLRLLK
I
>Mature_80_residues
SWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKKGSTNLAEQKALIKPVLRLLKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9688; Mature: 9556

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKK
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
GSTNLAEQKALIKPVLRLLKI
CCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKK
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
GSTNLAEQKALIKPVLRLLKI
CCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA