The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475081

Identifier: 113475081

GI number: 113475081

Start: 2076163

End: 2077434

Strand: Reverse

Name: 113475081

Synonym: Tery_1356

Alternate gene names: NA

Gene position: 2077434-2076163 (Counterclockwise)

Preceding gene: 113475082

Following gene: 113475080

Centisome position: 26.81

GC content: 40.09

Gene sequence:

>1272_bases
ATGAAAGCTTTATTTCTACACCCGAATTTTCCGGCTCAATATCGTCATATTATTACCGCTTTAGGAGCTAACCCAAAAAA
CCAAGTCGTCTTTGGTACAAAAAACGAAAGGCCAGAATGGAAAATACCAGGAGTTCATAAAGCACTATTCAACCCCAGTC
GGGAAGCCCGCCCAGAAACTCACCATTATGTGCGTCCTTTAGAAAGTGCAGTAATTTATGGACAAGCCGTGTTTAGAATG
GCAGAACAACTTAAGGTCAAAGGGTTTGTCCCAGATGTAATTTGTGGTCATTCAGGATGGGGGCCTACTCTATTTGTTAA
AGAAGCATTTCCTGGAGTTCCCTTACTTTGCTACTTTGAATGGTTCTATCATTCTCAGGGTTCTGATGCAGATTTTGACC
CTGCAGAACCCTTAACAGTAGATGATATGGCCAGAATTCGGATCAAAAATGCCCCCATATTAATAGACTTGTACTCTTGT
GATTGGGGACTATCTCCCACACACTGGCAGCGCTCCCAATTTCCTCAAGAACTCCAAAGCAAACTATCTGTACTGCATGA
TGGGGTGGATACCGACTATTTCAAACCAAATCCGGGGTCAAAACTGGTATTACCCAACTTAGACTTGTCTGGAGTAGATG
AACTGGTGACTTATGTAGCAAGAGGAATGGAACCATATCGAGGTTTTCCAGAATTTATCGAAGCGATCGCCTATATCCAA
GAAAGAAGGCCCAACTGTCATGTAGTAGTAGTTGGTTCTGAAAGAGTTTGCTATGGTAAATCATTACCAAATGGCAAAAC
TTACAAACAAGAGATGCTAGAAAAAATACCCTTGGACTTATCAAGAATTCACTTTGTTGGATCATTGCCCTATGGATTAT
ACTTGAAAGTCATTCAAGCATCAGATGTTCACATTTACCTAACCAGACCTTTTGTGCTTTCATGGTCAATGATTGAGTCC
CTATCAACTGGTTGCTTAATTGTCGGTTCAGACACAGCACCAGTTAGGGAAGTTATTCAAGATGGGAAAAATGGCCTATT
AGCAGACTTCTTCTCTCCTAAGCATATAGCTGACCGTGTTGATGAAGTTTTAGATCACCCAACTCGTATGGCAGAAATAC
GAGAAAAAGCACGGCAAACTGTATTAGAACGTTATGCTTTATCCAATCTATTAATAAAACATTTAGAACTAATTAATCAA
GTTGCTAATCGTAGCTTAACACCAACTAAAGGTAAGGAAACAAAAGGATCTCTTACCTTATCTAAATTCTAG

Upstream 100 bases:

>100_bases
TAAATGCACAACAGTTTACCTACTCTCTAAACTTATAATTTAGGTTAGTTGTATATTGAAAGTCTCTCCTGATTTAGTAT
TATTTTCAATTATCAAACTT

Downstream 100 bases:

>100_bases
GTACATTCAAAATTAGATATATCTGGGAACCATTAGTAAATTAATACCGTCCTCCGGTAATGTTTAGACTGTAAACTATA
ATCAATAAGTAAAGTACTAA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPETHHYVRPLESAVIYGQAVFRM
AEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFEWFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSC
DWGLSPTHWQRSQFPQELQSKLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ
ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQASDVHIYLTRPFVLSWSMIES
LSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRVDEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQ
VANRSLTPTKGKETKGSLTLSKF

Sequences:

>Translated_423_residues
MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPETHHYVRPLESAVIYGQAVFRM
AEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFEWFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSC
DWGLSPTHWQRSQFPQELQSKLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ
ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQASDVHIYLTRPFVLSWSMIES
LSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRVDEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQ
VANRSLTPTKGKETKGSLTLSKF
>Mature_423_residues
MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPETHHYVRPLESAVIYGQAVFRM
AEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFEWFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSC
DWGLSPTHWQRSQFPQELQSKLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ
ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQASDVHIYLTRPFVLSWSMIES
LSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRVDEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQ
VANRSLTPTKGKETKGSLTLSKF

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47826; Mature: 47826

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPET
CCEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCH
HHYVRPLESAVIYGQAVFRMAEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHH
WFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSCDWGLSPTHWQRSQFPQELQS
HHHCCCCCCCCCCCCCCCCCCCHHHEEECCCCEEEEEECCCCCCCCCCCHHHHCHHHHHH
KLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ
HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQA
HCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHEEECCCHHHEEEEEEE
SDVHIYLTRPFVLSWSMIESLSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRV
CCEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEECCCCCHHHHHHH
DEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQVANRSLTPTKGKETKGSLTL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
SKF
ECC
>Mature Secondary Structure
MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPET
CCEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCH
HHYVRPLESAVIYGQAVFRMAEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHH
WFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSCDWGLSPTHWQRSQFPQELQS
HHHCCCCCCCCCCCCCCCCCCCHHHEEECCCCEEEEEECCCCCCCCCCCHHHHCHHHHHH
KLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ
HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQA
HCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHEEECCCHHHEEEEEEE
SDVHIYLTRPFVLSWSMIESLSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRV
CCEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEECCCCCHHHHHHH
DEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQVANRSLTPTKGKETKGSLTL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
SKF
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA