| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475081
Identifier: 113475081
GI number: 113475081
Start: 2076163
End: 2077434
Strand: Reverse
Name: 113475081
Synonym: Tery_1356
Alternate gene names: NA
Gene position: 2077434-2076163 (Counterclockwise)
Preceding gene: 113475082
Following gene: 113475080
Centisome position: 26.81
GC content: 40.09
Gene sequence:
>1272_bases ATGAAAGCTTTATTTCTACACCCGAATTTTCCGGCTCAATATCGTCATATTATTACCGCTTTAGGAGCTAACCCAAAAAA CCAAGTCGTCTTTGGTACAAAAAACGAAAGGCCAGAATGGAAAATACCAGGAGTTCATAAAGCACTATTCAACCCCAGTC GGGAAGCCCGCCCAGAAACTCACCATTATGTGCGTCCTTTAGAAAGTGCAGTAATTTATGGACAAGCCGTGTTTAGAATG GCAGAACAACTTAAGGTCAAAGGGTTTGTCCCAGATGTAATTTGTGGTCATTCAGGATGGGGGCCTACTCTATTTGTTAA AGAAGCATTTCCTGGAGTTCCCTTACTTTGCTACTTTGAATGGTTCTATCATTCTCAGGGTTCTGATGCAGATTTTGACC CTGCAGAACCCTTAACAGTAGATGATATGGCCAGAATTCGGATCAAAAATGCCCCCATATTAATAGACTTGTACTCTTGT GATTGGGGACTATCTCCCACACACTGGCAGCGCTCCCAATTTCCTCAAGAACTCCAAAGCAAACTATCTGTACTGCATGA TGGGGTGGATACCGACTATTTCAAACCAAATCCGGGGTCAAAACTGGTATTACCCAACTTAGACTTGTCTGGAGTAGATG AACTGGTGACTTATGTAGCAAGAGGAATGGAACCATATCGAGGTTTTCCAGAATTTATCGAAGCGATCGCCTATATCCAA GAAAGAAGGCCCAACTGTCATGTAGTAGTAGTTGGTTCTGAAAGAGTTTGCTATGGTAAATCATTACCAAATGGCAAAAC TTACAAACAAGAGATGCTAGAAAAAATACCCTTGGACTTATCAAGAATTCACTTTGTTGGATCATTGCCCTATGGATTAT ACTTGAAAGTCATTCAAGCATCAGATGTTCACATTTACCTAACCAGACCTTTTGTGCTTTCATGGTCAATGATTGAGTCC CTATCAACTGGTTGCTTAATTGTCGGTTCAGACACAGCACCAGTTAGGGAAGTTATTCAAGATGGGAAAAATGGCCTATT AGCAGACTTCTTCTCTCCTAAGCATATAGCTGACCGTGTTGATGAAGTTTTAGATCACCCAACTCGTATGGCAGAAATAC GAGAAAAAGCACGGCAAACTGTATTAGAACGTTATGCTTTATCCAATCTATTAATAAAACATTTAGAACTAATTAATCAA GTTGCTAATCGTAGCTTAACACCAACTAAAGGTAAGGAAACAAAAGGATCTCTTACCTTATCTAAATTCTAG
Upstream 100 bases:
>100_bases TAAATGCACAACAGTTTACCTACTCTCTAAACTTATAATTTAGGTTAGTTGTATATTGAAAGTCTCTCCTGATTTAGTAT TATTTTCAATTATCAAACTT
Downstream 100 bases:
>100_bases GTACATTCAAAATTAGATATATCTGGGAACCATTAGTAAATTAATACCGTCCTCCGGTAATGTTTAGACTGTAAACTATA ATCAATAAGTAAAGTACTAA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPETHHYVRPLESAVIYGQAVFRM AEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFEWFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSC DWGLSPTHWQRSQFPQELQSKLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQASDVHIYLTRPFVLSWSMIES LSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRVDEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQ VANRSLTPTKGKETKGSLTLSKF
Sequences:
>Translated_423_residues MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPETHHYVRPLESAVIYGQAVFRM AEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFEWFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSC DWGLSPTHWQRSQFPQELQSKLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQASDVHIYLTRPFVLSWSMIES LSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRVDEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQ VANRSLTPTKGKETKGSLTLSKF >Mature_423_residues MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPETHHYVRPLESAVIYGQAVFRM AEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFEWFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSC DWGLSPTHWQRSQFPQELQSKLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQASDVHIYLTRPFVLSWSMIES LSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRVDEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQ VANRSLTPTKGKETKGSLTLSKF
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47826; Mature: 47826
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPET CCEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCH HHYVRPLESAVIYGQAVFRMAEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHH WFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSCDWGLSPTHWQRSQFPQELQS HHHCCCCCCCCCCCCCCCCCCCHHHEEECCCCEEEEEECCCCCCCCCCCHHHHCHHHHHH KLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQA HCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHEEECCCHHHEEEEEEE SDVHIYLTRPFVLSWSMIESLSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRV CCEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEECCCCCHHHHHHH DEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQVANRSLTPTKGKETKGSLTL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE SKF ECC >Mature Secondary Structure MKALFLHPNFPAQYRHIITALGANPKNQVVFGTKNERPEWKIPGVHKALFNPSREARPET CCEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCH HHYVRPLESAVIYGQAVFRMAEQLKVKGFVPDVICGHSGWGPTLFVKEAFPGVPLLCYFE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHH WFYHSQGSDADFDPAEPLTVDDMARIRIKNAPILIDLYSCDWGLSPTHWQRSQFPQELQS HHHCCCCCCCCCCCCCCCCCCCHHHEEECCCCEEEEEECCCCCCCCCCCHHHHCHHHHHH KLSVLHDGVDTDYFKPNPGSKLVLPNLDLSGVDELVTYVARGMEPYRGFPEFIEAIAYIQ HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ERRPNCHVVVVGSERVCYGKSLPNGKTYKQEMLEKIPLDLSRIHFVGSLPYGLYLKVIQA HCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHEEECCCHHHEEEEEEE SDVHIYLTRPFVLSWSMIESLSTGCLIVGSDTAPVREVIQDGKNGLLADFFSPKHIADRV CCEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEECCCCCHHHHHHH DEVLDHPTRMAEIREKARQTVLERYALSNLLIKHLELINQVANRSLTPTKGKETKGSLTL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE SKF ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA